Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31822 | 95689;95690;95691 | chr2:178545646;178545645;178545644 | chr2:179410373;179410372;179410371 |
N2AB | 30181 | 90766;90767;90768 | chr2:178545646;178545645;178545644 | chr2:179410373;179410372;179410371 |
N2A | 29254 | 87985;87986;87987 | chr2:178545646;178545645;178545644 | chr2:179410373;179410372;179410371 |
N2B | 22757 | 68494;68495;68496 | chr2:178545646;178545645;178545644 | chr2:179410373;179410372;179410371 |
Novex-1 | 22882 | 68869;68870;68871 | chr2:178545646;178545645;178545644 | chr2:179410373;179410372;179410371 |
Novex-2 | 22949 | 69070;69071;69072 | chr2:178545646;178545645;178545644 | chr2:179410373;179410372;179410371 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.977 | N | 0.679 | 0.506 | 0.355658859761 | gnomAD-4.0.0 | 4.77426E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.29873E-05 | 0 |
E/D | rs1302716458 | -0.634 | 0.117 | N | 0.201 | 0.024 | 0.158396225186 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/D | rs1302716458 | -0.634 | 0.117 | N | 0.201 | 0.024 | 0.158396225186 | gnomAD-4.0.0 | 1.59143E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
E/K | rs986919717 | None | 0.977 | N | 0.607 | 0.336 | 0.282179105231 | gnomAD-4.0.0 | 1.59144E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85883E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2588 | likely_benign | 0.2466 | benign | -0.678 | Destabilizing | 0.977 | D | 0.679 | prob.neutral | N | 0.517710798 | None | None | N |
E/C | 0.8876 | likely_pathogenic | 0.8769 | pathogenic | -0.258 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/D | 0.0949 | likely_benign | 0.0924 | benign | -0.902 | Destabilizing | 0.117 | N | 0.201 | neutral | N | 0.364962899 | None | None | N |
E/F | 0.8551 | likely_pathogenic | 0.8408 | pathogenic | -0.541 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/G | 0.1729 | likely_benign | 0.1418 | benign | -0.975 | Destabilizing | 0.993 | D | 0.717 | prob.delet. | N | 0.468071411 | None | None | N |
E/H | 0.6301 | likely_pathogenic | 0.5885 | pathogenic | -0.873 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
E/I | 0.7007 | likely_pathogenic | 0.6828 | pathogenic | 0.108 | Stabilizing | 0.998 | D | 0.761 | deleterious | None | None | None | None | N |
E/K | 0.355 | ambiguous | 0.3075 | benign | -0.505 | Destabilizing | 0.977 | D | 0.607 | neutral | N | 0.494833938 | None | None | N |
E/L | 0.6244 | likely_pathogenic | 0.5937 | pathogenic | 0.108 | Stabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
E/M | 0.638 | likely_pathogenic | 0.6229 | pathogenic | 0.544 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/N | 0.2082 | likely_benign | 0.1884 | benign | -0.744 | Destabilizing | 0.99 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/P | 0.8856 | likely_pathogenic | 0.8793 | pathogenic | -0.133 | Destabilizing | 0.998 | D | 0.744 | deleterious | None | None | None | None | N |
E/Q | 0.21 | likely_benign | 0.1966 | benign | -0.662 | Destabilizing | 0.997 | D | 0.683 | prob.neutral | N | 0.501010549 | None | None | N |
E/R | 0.4985 | ambiguous | 0.4613 | ambiguous | -0.358 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/S | 0.2183 | likely_benign | 0.2012 | benign | -1.006 | Destabilizing | 0.983 | D | 0.648 | neutral | None | None | None | None | N |
E/T | 0.2981 | likely_benign | 0.2762 | benign | -0.775 | Destabilizing | 0.998 | D | 0.728 | prob.delet. | None | None | None | None | N |
E/V | 0.4921 | ambiguous | 0.4726 | ambiguous | -0.133 | Destabilizing | 0.997 | D | 0.766 | deleterious | N | 0.493587643 | None | None | N |
E/W | 0.9407 | likely_pathogenic | 0.9306 | pathogenic | -0.434 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
E/Y | 0.6964 | likely_pathogenic | 0.6674 | pathogenic | -0.343 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.