Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31823 | 95692;95693;95694 | chr2:178545643;178545642;178545641 | chr2:179410370;179410369;179410368 |
N2AB | 30182 | 90769;90770;90771 | chr2:178545643;178545642;178545641 | chr2:179410370;179410369;179410368 |
N2A | 29255 | 87988;87989;87990 | chr2:178545643;178545642;178545641 | chr2:179410370;179410369;179410368 |
N2B | 22758 | 68497;68498;68499 | chr2:178545643;178545642;178545641 | chr2:179410370;179410369;179410368 |
Novex-1 | 22883 | 68872;68873;68874 | chr2:178545643;178545642;178545641 | chr2:179410370;179410369;179410368 |
Novex-2 | 22950 | 69073;69074;69075 | chr2:178545643;178545642;178545641 | chr2:179410370;179410369;179410368 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs794729539 | -1.034 | 0.999 | N | 0.451 | 0.278 | None | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
H/R | rs794729539 | -1.034 | 0.999 | N | 0.451 | 0.278 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
H/R | rs794729539 | -1.034 | 0.999 | N | 0.451 | 0.278 | None | gnomAD-4.0.0 | 2.04499E-05 | None | None | None | None | N | None | 1.33472E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54292E-05 | 0 | 3.20225E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4608 | ambiguous | 0.3705 | ambiguous | -1.073 | Destabilizing | 0.993 | D | 0.588 | neutral | None | None | None | None | N |
H/C | 0.2181 | likely_benign | 0.1917 | benign | -0.361 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
H/D | 0.4207 | ambiguous | 0.3309 | benign | -0.741 | Destabilizing | 0.999 | D | 0.571 | neutral | N | 0.47420795 | None | None | N |
H/E | 0.5316 | ambiguous | 0.4328 | ambiguous | -0.64 | Destabilizing | 0.998 | D | 0.456 | neutral | None | None | None | None | N |
H/F | 0.3021 | likely_benign | 0.2801 | benign | 0.033 | Stabilizing | 0.996 | D | 0.582 | neutral | None | None | None | None | N |
H/G | 0.489 | ambiguous | 0.3951 | ambiguous | -1.431 | Destabilizing | 0.998 | D | 0.592 | neutral | None | None | None | None | N |
H/I | 0.5388 | ambiguous | 0.4708 | ambiguous | -0.075 | Destabilizing | 0.991 | D | 0.662 | neutral | None | None | None | None | N |
H/K | 0.5818 | likely_pathogenic | 0.4558 | ambiguous | -0.924 | Destabilizing | 0.999 | D | 0.568 | neutral | None | None | None | None | N |
H/L | 0.3076 | likely_benign | 0.2497 | benign | -0.075 | Destabilizing | 0.135 | N | 0.536 | neutral | N | 0.493487144 | None | None | N |
H/M | 0.5155 | ambiguous | 0.4785 | ambiguous | -0.195 | Destabilizing | 0.996 | D | 0.707 | prob.neutral | None | None | None | None | N |
H/N | 0.1122 | likely_benign | 0.099 | benign | -0.938 | Destabilizing | 0.997 | D | 0.455 | neutral | N | 0.443231682 | None | None | N |
H/P | 0.9005 | likely_pathogenic | 0.8542 | pathogenic | -0.389 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | N | 0.504704215 | None | None | N |
H/Q | 0.3086 | likely_benign | 0.2429 | benign | -0.684 | Destabilizing | 0.999 | D | 0.465 | neutral | N | 0.455102114 | None | None | N |
H/R | 0.3434 | ambiguous | 0.2508 | benign | -1.271 | Destabilizing | 0.999 | D | 0.451 | neutral | N | 0.46029729 | None | None | N |
H/S | 0.2635 | likely_benign | 0.2142 | benign | -1.048 | Destabilizing | 0.998 | D | 0.542 | neutral | None | None | None | None | N |
H/T | 0.328 | likely_benign | 0.2574 | benign | -0.848 | Destabilizing | 0.998 | D | 0.605 | neutral | None | None | None | None | N |
H/V | 0.4449 | ambiguous | 0.3748 | ambiguous | -0.389 | Destabilizing | 0.971 | D | 0.65 | neutral | None | None | None | None | N |
H/W | 0.5298 | ambiguous | 0.4884 | ambiguous | 0.291 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
H/Y | 0.1124 | likely_benign | 0.1045 | benign | 0.433 | Stabilizing | 0.997 | D | 0.489 | neutral | N | 0.435689634 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.