Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31837 | 95734;95735;95736 | chr2:178545601;178545600;178545599 | chr2:179410328;179410327;179410326 |
N2AB | 30196 | 90811;90812;90813 | chr2:178545601;178545600;178545599 | chr2:179410328;179410327;179410326 |
N2A | 29269 | 88030;88031;88032 | chr2:178545601;178545600;178545599 | chr2:179410328;179410327;179410326 |
N2B | 22772 | 68539;68540;68541 | chr2:178545601;178545600;178545599 | chr2:179410328;179410327;179410326 |
Novex-1 | 22897 | 68914;68915;68916 | chr2:178545601;178545600;178545599 | chr2:179410328;179410327;179410326 |
Novex-2 | 22964 | 69115;69116;69117 | chr2:178545601;178545600;178545599 | chr2:179410328;179410327;179410326 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | None | N | 0.266 | 0.145 | 0.0846915920261 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1885 | likely_benign | 0.2013 | benign | -0.479 | Destabilizing | 0.016 | N | 0.599 | neutral | None | None | None | None | I |
N/C | 0.1263 | likely_benign | 0.1377 | benign | 0.383 | Stabilizing | 0.824 | D | 0.687 | prob.neutral | None | None | None | None | I |
N/D | 0.2444 | likely_benign | 0.2381 | benign | -0.497 | Destabilizing | 0.027 | N | 0.565 | neutral | N | 0.477613614 | None | None | I |
N/E | 0.5491 | ambiguous | 0.5681 | pathogenic | -0.52 | Destabilizing | 0.035 | N | 0.548 | neutral | None | None | None | None | I |
N/F | 0.5674 | likely_pathogenic | 0.6026 | pathogenic | -0.8 | Destabilizing | 0.555 | D | 0.689 | prob.neutral | None | None | None | None | I |
N/G | 0.3282 | likely_benign | 0.3374 | benign | -0.677 | Destabilizing | 0.035 | N | 0.457 | neutral | None | None | None | None | I |
N/H | 0.1292 | likely_benign | 0.1419 | benign | -0.776 | Destabilizing | 0.484 | N | 0.634 | neutral | N | 0.484753017 | None | None | I |
N/I | 0.3275 | likely_benign | 0.3755 | ambiguous | -0.031 | Destabilizing | 0.317 | N | 0.698 | prob.neutral | N | 0.462241517 | None | None | I |
N/K | 0.516 | ambiguous | 0.5514 | ambiguous | 0.004 | Stabilizing | 0.027 | N | 0.546 | neutral | N | 0.443309039 | None | None | I |
N/L | 0.3088 | likely_benign | 0.3292 | benign | -0.031 | Destabilizing | 0.149 | N | 0.687 | prob.neutral | None | None | None | None | I |
N/M | 0.3045 | likely_benign | 0.34 | benign | 0.621 | Stabilizing | 0.791 | D | 0.683 | prob.neutral | None | None | None | None | I |
N/P | 0.9579 | likely_pathogenic | 0.9608 | pathogenic | -0.154 | Destabilizing | 0.38 | N | 0.691 | prob.neutral | None | None | None | None | I |
N/Q | 0.4087 | ambiguous | 0.4276 | ambiguous | -0.614 | Destabilizing | 0.149 | N | 0.666 | neutral | None | None | None | None | I |
N/R | 0.5016 | ambiguous | 0.5362 | ambiguous | 0.14 | Stabilizing | 0.149 | N | 0.675 | prob.neutral | None | None | None | None | I |
N/S | 0.0523 | likely_benign | 0.0569 | benign | -0.26 | Destabilizing | None | N | 0.266 | neutral | N | 0.294158807 | None | None | I |
N/T | 0.1326 | likely_benign | 0.1532 | benign | -0.142 | Destabilizing | 0.027 | N | 0.531 | neutral | N | 0.439172656 | None | None | I |
N/V | 0.275 | likely_benign | 0.3076 | benign | -0.154 | Destabilizing | 0.149 | N | 0.707 | prob.neutral | None | None | None | None | I |
N/W | 0.8196 | likely_pathogenic | 0.831 | pathogenic | -0.715 | Destabilizing | 0.935 | D | 0.733 | prob.delet. | None | None | None | None | I |
N/Y | 0.2217 | likely_benign | 0.2348 | benign | -0.459 | Destabilizing | 0.484 | N | 0.679 | prob.neutral | N | 0.503338778 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.