Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31838 | 95737;95738;95739 | chr2:178545598;178545597;178545596 | chr2:179410325;179410324;179410323 |
N2AB | 30197 | 90814;90815;90816 | chr2:178545598;178545597;178545596 | chr2:179410325;179410324;179410323 |
N2A | 29270 | 88033;88034;88035 | chr2:178545598;178545597;178545596 | chr2:179410325;179410324;179410323 |
N2B | 22773 | 68542;68543;68544 | chr2:178545598;178545597;178545596 | chr2:179410325;179410324;179410323 |
Novex-1 | 22898 | 68917;68918;68919 | chr2:178545598;178545597;178545596 | chr2:179410325;179410324;179410323 |
Novex-2 | 22965 | 69118;69119;69120 | chr2:178545598;178545597;178545596 | chr2:179410325;179410324;179410323 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1196738790 | -0.438 | 0.83 | N | 0.657 | 0.309 | 0.366277470483 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65508E-04 |
E/G | rs1196738790 | -0.438 | 0.83 | N | 0.657 | 0.309 | 0.366277470483 | gnomAD-4.0.0 | 2.73693E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69854E-06 | 0 | 1.65684E-05 |
E/V | None | None | 0.908 | N | 0.707 | 0.392 | 0.363944505237 | gnomAD-4.0.0 | 1.36847E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79902E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1721 | likely_benign | 0.1537 | benign | -0.186 | Destabilizing | 0.581 | D | 0.625 | neutral | N | 0.515499999 | None | None | N |
E/C | 0.809 | likely_pathogenic | 0.7565 | pathogenic | 0.037 | Stabilizing | 0.993 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/D | 0.0912 | likely_benign | 0.0789 | benign | -0.208 | Destabilizing | 0.004 | N | 0.191 | neutral | N | 0.505283005 | None | None | N |
E/F | 0.8031 | likely_pathogenic | 0.7391 | pathogenic | -0.208 | Destabilizing | 0.993 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/G | 0.2378 | likely_benign | 0.1914 | benign | -0.337 | Destabilizing | 0.83 | D | 0.657 | neutral | N | 0.485362117 | None | None | N |
E/H | 0.5366 | ambiguous | 0.4757 | ambiguous | 0.172 | Stabilizing | 0.98 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/I | 0.3817 | ambiguous | 0.333 | benign | 0.162 | Stabilizing | 0.929 | D | 0.7 | prob.neutral | None | None | None | None | N |
E/K | 0.2152 | likely_benign | 0.1817 | benign | 0.455 | Stabilizing | 0.581 | D | 0.592 | neutral | N | 0.489121474 | None | None | N |
E/L | 0.448 | ambiguous | 0.3958 | ambiguous | 0.162 | Stabilizing | 0.866 | D | 0.694 | prob.neutral | None | None | None | None | N |
E/M | 0.4976 | ambiguous | 0.4415 | ambiguous | 0.162 | Stabilizing | 0.993 | D | 0.674 | neutral | None | None | None | None | N |
E/N | 0.2461 | likely_benign | 0.1947 | benign | 0.253 | Stabilizing | 0.764 | D | 0.738 | prob.delet. | None | None | None | None | N |
E/P | 0.3105 | likely_benign | 0.3189 | benign | 0.065 | Stabilizing | 0.929 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/Q | 0.197 | likely_benign | 0.1737 | benign | 0.264 | Stabilizing | 0.83 | D | 0.671 | neutral | N | 0.479081467 | None | None | N |
E/R | 0.3505 | ambiguous | 0.3077 | benign | 0.632 | Stabilizing | 0.866 | D | 0.756 | deleterious | None | None | None | None | N |
E/S | 0.2189 | likely_benign | 0.1856 | benign | 0.083 | Stabilizing | 0.48 | N | 0.63 | neutral | None | None | None | None | N |
E/T | 0.2466 | likely_benign | 0.2118 | benign | 0.208 | Stabilizing | 0.866 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/V | 0.2396 | likely_benign | 0.2096 | benign | 0.065 | Stabilizing | 0.908 | D | 0.707 | prob.neutral | N | 0.492337103 | None | None | N |
E/W | 0.9233 | likely_pathogenic | 0.8892 | pathogenic | -0.124 | Destabilizing | 0.993 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/Y | 0.6673 | likely_pathogenic | 0.5726 | pathogenic | 0.027 | Stabilizing | 0.993 | D | 0.699 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.