Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31842 | 95749;95750;95751 | chr2:178545586;178545585;178545584 | chr2:179410313;179410312;179410311 |
N2AB | 30201 | 90826;90827;90828 | chr2:178545586;178545585;178545584 | chr2:179410313;179410312;179410311 |
N2A | 29274 | 88045;88046;88047 | chr2:178545586;178545585;178545584 | chr2:179410313;179410312;179410311 |
N2B | 22777 | 68554;68555;68556 | chr2:178545586;178545585;178545584 | chr2:179410313;179410312;179410311 |
Novex-1 | 22902 | 68929;68930;68931 | chr2:178545586;178545585;178545584 | chr2:179410313;179410312;179410311 |
Novex-2 | 22969 | 69130;69131;69132 | chr2:178545586;178545585;178545584 | chr2:179410313;179410312;179410311 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/D | rs1452962684 | -3.44 | 1.0 | D | 0.896 | 0.887 | 0.793836073555 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
Y/D | rs1452962684 | -3.44 | 1.0 | D | 0.896 | 0.887 | 0.793836073555 | gnomAD-4.0.0 | 1.36847E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79903E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9976 | likely_pathogenic | 0.9975 | pathogenic | -3.742 | Highly Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
Y/C | 0.9487 | likely_pathogenic | 0.9465 | pathogenic | -2.092 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | D | 0.66371008 | None | None | N |
Y/D | 0.9971 | likely_pathogenic | 0.9965 | pathogenic | -4.027 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | D | 0.664113688 | None | None | N |
Y/E | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -3.816 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
Y/F | 0.2114 | likely_benign | 0.2386 | benign | -1.648 | Destabilizing | 0.999 | D | 0.651 | neutral | D | 0.593335624 | None | None | N |
Y/G | 0.9942 | likely_pathogenic | 0.9939 | pathogenic | -4.134 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
Y/H | 0.9798 | likely_pathogenic | 0.9771 | pathogenic | -2.804 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.66371008 | None | None | N |
Y/I | 0.9617 | likely_pathogenic | 0.9604 | pathogenic | -2.395 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Y/K | 0.999 | likely_pathogenic | 0.9988 | pathogenic | -2.767 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
Y/L | 0.9301 | likely_pathogenic | 0.9198 | pathogenic | -2.395 | Highly Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
Y/M | 0.9851 | likely_pathogenic | 0.9848 | pathogenic | -2.023 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
Y/N | 0.9851 | likely_pathogenic | 0.982 | pathogenic | -3.57 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | D | 0.664113688 | None | None | N |
Y/P | 0.9993 | likely_pathogenic | 0.9993 | pathogenic | -2.865 | Highly Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
Y/Q | 0.9987 | likely_pathogenic | 0.9985 | pathogenic | -3.307 | Highly Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
Y/R | 0.9956 | likely_pathogenic | 0.9951 | pathogenic | -2.479 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Y/S | 0.9912 | likely_pathogenic | 0.9899 | pathogenic | -3.856 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.664113688 | None | None | N |
Y/T | 0.9961 | likely_pathogenic | 0.9954 | pathogenic | -3.532 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
Y/V | 0.9521 | likely_pathogenic | 0.9507 | pathogenic | -2.865 | Highly Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
Y/W | 0.8809 | likely_pathogenic | 0.8741 | pathogenic | -0.894 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.