Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31843 | 95752;95753;95754 | chr2:178545583;178545582;178545581 | chr2:179410310;179410309;179410308 |
N2AB | 30202 | 90829;90830;90831 | chr2:178545583;178545582;178545581 | chr2:179410310;179410309;179410308 |
N2A | 29275 | 88048;88049;88050 | chr2:178545583;178545582;178545581 | chr2:179410310;179410309;179410308 |
N2B | 22778 | 68557;68558;68559 | chr2:178545583;178545582;178545581 | chr2:179410310;179410309;179410308 |
Novex-1 | 22903 | 68932;68933;68934 | chr2:178545583;178545582;178545581 | chr2:179410310;179410309;179410308 |
Novex-2 | 22970 | 69133;69134;69135 | chr2:178545583;178545582;178545581 | chr2:179410310;179410309;179410308 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1696696732 | None | 0.997 | N | 0.784 | 0.626 | 0.582449840715 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07469E-04 | 0 |
L/P | rs1696696732 | None | 0.997 | N | 0.784 | 0.626 | 0.582449840715 | gnomAD-4.0.0 | 6.57376E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.07469E-04 | 0 |
L/R | None | None | 0.997 | N | 0.753 | 0.57 | 0.461323234107 | gnomAD-4.0.0 | 1.5914E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3691 | ambiguous | 0.3509 | ambiguous | -2.42 | Highly Destabilizing | 0.953 | D | 0.604 | neutral | None | None | None | None | N |
L/C | 0.4784 | ambiguous | 0.4677 | ambiguous | -1.676 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
L/D | 0.8902 | likely_pathogenic | 0.8774 | pathogenic | -2.704 | Highly Destabilizing | 0.998 | D | 0.787 | deleterious | None | None | None | None | N |
L/E | 0.5698 | likely_pathogenic | 0.5563 | ambiguous | -2.636 | Highly Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | N |
L/F | 0.1459 | likely_benign | 0.1399 | benign | -1.647 | Destabilizing | 0.986 | D | 0.648 | neutral | None | None | None | None | N |
L/G | 0.835 | likely_pathogenic | 0.8027 | pathogenic | -2.807 | Highly Destabilizing | 0.998 | D | 0.77 | deleterious | None | None | None | None | N |
L/H | 0.2779 | likely_benign | 0.2618 | benign | -1.989 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | N |
L/I | 0.0758 | likely_benign | 0.0781 | benign | -1.365 | Destabilizing | 0.046 | N | 0.387 | neutral | N | 0.342800902 | None | None | N |
L/K | 0.4943 | ambiguous | 0.4843 | ambiguous | -1.854 | Destabilizing | 0.993 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/M | 0.1028 | likely_benign | 0.098 | benign | -1.123 | Destabilizing | 0.986 | D | 0.685 | prob.neutral | None | None | None | None | N |
L/N | 0.5831 | likely_pathogenic | 0.5711 | pathogenic | -1.865 | Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | N |
L/P | 0.9875 | likely_pathogenic | 0.9882 | pathogenic | -1.693 | Destabilizing | 0.997 | D | 0.784 | deleterious | N | 0.477889698 | None | None | N |
L/Q | 0.2316 | likely_benign | 0.2129 | benign | -2.017 | Highly Destabilizing | 0.997 | D | 0.742 | deleterious | N | 0.477786972 | None | None | N |
L/R | 0.3608 | ambiguous | 0.3332 | benign | -1.186 | Destabilizing | 0.997 | D | 0.753 | deleterious | N | 0.449637579 | None | None | N |
L/S | 0.4283 | ambiguous | 0.4017 | ambiguous | -2.453 | Highly Destabilizing | 0.993 | D | 0.723 | prob.delet. | None | None | None | None | N |
L/T | 0.264 | likely_benign | 0.2483 | benign | -2.276 | Highly Destabilizing | 0.986 | D | 0.642 | neutral | None | None | None | None | N |
L/V | 0.0828 | likely_benign | 0.0845 | benign | -1.693 | Destabilizing | 0.17 | N | 0.502 | neutral | N | 0.385820961 | None | None | N |
L/W | 0.2951 | likely_benign | 0.2724 | benign | -1.844 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
L/Y | 0.3821 | ambiguous | 0.3637 | ambiguous | -1.654 | Destabilizing | 0.998 | D | 0.696 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.