Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31845 | 95758;95759;95760 | chr2:178545577;178545576;178545575 | chr2:179410304;179410303;179410302 |
N2AB | 30204 | 90835;90836;90837 | chr2:178545577;178545576;178545575 | chr2:179410304;179410303;179410302 |
N2A | 29277 | 88054;88055;88056 | chr2:178545577;178545576;178545575 | chr2:179410304;179410303;179410302 |
N2B | 22780 | 68563;68564;68565 | chr2:178545577;178545576;178545575 | chr2:179410304;179410303;179410302 |
Novex-1 | 22905 | 68938;68939;68940 | chr2:178545577;178545576;178545575 | chr2:179410304;179410303;179410302 |
Novex-2 | 22972 | 69139;69140;69141 | chr2:178545577;178545576;178545575 | chr2:179410304;179410303;179410302 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs772648821 | -2.372 | 0.999 | N | 0.781 | 0.325 | 0.442261297928 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.56E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8359 | likely_pathogenic | 0.8335 | pathogenic | -1.646 | Destabilizing | 0.999 | D | 0.797 | deleterious | N | 0.501933269 | None | None | N |
D/C | 0.9439 | likely_pathogenic | 0.9499 | pathogenic | -0.826 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
D/E | 0.3629 | ambiguous | 0.3936 | ambiguous | -0.822 | Destabilizing | 0.767 | D | 0.418 | neutral | N | 0.297199112 | None | None | N |
D/F | 0.926 | likely_pathogenic | 0.9398 | pathogenic | -1.46 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
D/G | 0.9051 | likely_pathogenic | 0.9012 | pathogenic | -2.025 | Highly Destabilizing | 0.998 | D | 0.77 | deleterious | N | 0.503146777 | None | None | N |
D/H | 0.8318 | likely_pathogenic | 0.8425 | pathogenic | -1.345 | Destabilizing | 1.0 | D | 0.829 | deleterious | N | 0.496431448 | None | None | N |
D/I | 0.9244 | likely_pathogenic | 0.9377 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
D/K | 0.9638 | likely_pathogenic | 0.9693 | pathogenic | -1.49 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
D/L | 0.9074 | likely_pathogenic | 0.9167 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
D/M | 0.9634 | likely_pathogenic | 0.9689 | pathogenic | 0.164 | Stabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
D/N | 0.6146 | likely_pathogenic | 0.6569 | pathogenic | -1.601 | Destabilizing | 0.999 | D | 0.781 | deleterious | N | 0.496778165 | None | None | N |
D/P | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | -0.918 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
D/Q | 0.8661 | likely_pathogenic | 0.8775 | pathogenic | -1.329 | Destabilizing | 0.999 | D | 0.806 | deleterious | None | None | None | None | N |
D/R | 0.9632 | likely_pathogenic | 0.9661 | pathogenic | -1.349 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
D/S | 0.6883 | likely_pathogenic | 0.7062 | pathogenic | -2.302 | Highly Destabilizing | 0.997 | D | 0.702 | prob.neutral | None | None | None | None | N |
D/T | 0.8843 | likely_pathogenic | 0.9036 | pathogenic | -1.94 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
D/V | 0.8375 | likely_pathogenic | 0.8503 | pathogenic | -0.918 | Destabilizing | 0.999 | D | 0.863 | deleterious | N | 0.521039104 | None | None | N |
D/W | 0.9807 | likely_pathogenic | 0.9832 | pathogenic | -1.506 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
D/Y | 0.7079 | likely_pathogenic | 0.7328 | pathogenic | -1.271 | Destabilizing | 1.0 | D | 0.861 | deleterious | N | 0.46741805 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.