Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31846 | 95761;95762;95763 | chr2:178545574;178545573;178545572 | chr2:179410301;179410300;179410299 |
N2AB | 30205 | 90838;90839;90840 | chr2:178545574;178545573;178545572 | chr2:179410301;179410300;179410299 |
N2A | 29278 | 88057;88058;88059 | chr2:178545574;178545573;178545572 | chr2:179410301;179410300;179410299 |
N2B | 22781 | 68566;68567;68568 | chr2:178545574;178545573;178545572 | chr2:179410301;179410300;179410299 |
Novex-1 | 22906 | 68941;68942;68943 | chr2:178545574;178545573;178545572 | chr2:179410301;179410300;179410299 |
Novex-2 | 22973 | 69142;69143;69144 | chr2:178545574;178545573;178545572 | chr2:179410301;179410300;179410299 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs759982252 | -1.344 | 0.999 | N | 0.723 | 0.3 | None | gnomAD-2.1.1 | 1.2E-05 | None | None | None | None | N | None | 1.93748E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/R | rs759982252 | -1.344 | 0.999 | N | 0.723 | 0.3 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs759982252 | -1.344 | 0.999 | N | 0.723 | 0.3 | None | gnomAD-4.0.0 | 8.96817E-06 | None | None | None | None | N | None | 1.18403E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9702 | likely_pathogenic | 0.9695 | pathogenic | -1.39 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
K/C | 0.8909 | likely_pathogenic | 0.8943 | pathogenic | -1.45 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
K/D | 0.9986 | likely_pathogenic | 0.9985 | pathogenic | -2.067 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
K/E | 0.9503 | likely_pathogenic | 0.9503 | pathogenic | -1.736 | Destabilizing | 0.999 | D | 0.747 | deleterious | N | 0.497057136 | None | None | N |
K/F | 0.9758 | likely_pathogenic | 0.9709 | pathogenic | -0.614 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
K/G | 0.9824 | likely_pathogenic | 0.9846 | pathogenic | -1.902 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
K/H | 0.8178 | likely_pathogenic | 0.8003 | pathogenic | -1.66 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
K/I | 0.8967 | likely_pathogenic | 0.8656 | pathogenic | 0.074 | Stabilizing | 1.0 | D | 0.879 | deleterious | N | 0.47511454 | None | None | N |
K/L | 0.8734 | likely_pathogenic | 0.844 | pathogenic | 0.074 | Stabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
K/M | 0.7105 | likely_pathogenic | 0.6727 | pathogenic | -0.288 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
K/N | 0.9935 | likely_pathogenic | 0.9929 | pathogenic | -1.924 | Destabilizing | 1.0 | D | 0.826 | deleterious | D | 0.526517697 | None | None | N |
K/P | 0.9993 | likely_pathogenic | 0.9993 | pathogenic | -0.395 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
K/Q | 0.5836 | likely_pathogenic | 0.5857 | pathogenic | -1.501 | Destabilizing | 1.0 | D | 0.839 | deleterious | N | 0.484384158 | None | None | N |
K/R | 0.1104 | likely_benign | 0.0995 | benign | -0.887 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | N | 0.441847602 | None | None | N |
K/S | 0.9836 | likely_pathogenic | 0.9833 | pathogenic | -2.442 | Highly Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
K/T | 0.9219 | likely_pathogenic | 0.9182 | pathogenic | -1.834 | Destabilizing | 1.0 | D | 0.83 | deleterious | N | 0.507145994 | None | None | N |
K/V | 0.8535 | likely_pathogenic | 0.8218 | pathogenic | -0.395 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
K/W | 0.9664 | likely_pathogenic | 0.9557 | pathogenic | -0.682 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
K/Y | 0.9216 | likely_pathogenic | 0.904 | pathogenic | -0.333 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.