Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31860 | 95803;95804;95805 | chr2:178545532;178545531;178545530 | chr2:179410259;179410258;179410257 |
N2AB | 30219 | 90880;90881;90882 | chr2:178545532;178545531;178545530 | chr2:179410259;179410258;179410257 |
N2A | 29292 | 88099;88100;88101 | chr2:178545532;178545531;178545530 | chr2:179410259;179410258;179410257 |
N2B | 22795 | 68608;68609;68610 | chr2:178545532;178545531;178545530 | chr2:179410259;179410258;179410257 |
Novex-1 | 22920 | 68983;68984;68985 | chr2:178545532;178545531;178545530 | chr2:179410259;179410258;179410257 |
Novex-2 | 22987 | 69184;69185;69186 | chr2:178545532;178545531;178545530 | chr2:179410259;179410258;179410257 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.134 | N | 0.167 | 0.065 | 0.17948927462 | gnomAD-4.0.0 | 6.84255E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99551E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1832 | likely_benign | 0.1887 | benign | -0.105 | Destabilizing | 0.92 | D | 0.359 | neutral | N | 0.448197571 | None | None | N |
D/C | 0.6602 | likely_pathogenic | 0.667 | pathogenic | -0.366 | Destabilizing | 0.999 | D | 0.465 | neutral | None | None | None | None | N |
D/E | 0.1256 | likely_benign | 0.128 | benign | -0.323 | Destabilizing | 0.134 | N | 0.167 | neutral | N | 0.430611888 | None | None | N |
D/F | 0.6395 | likely_pathogenic | 0.6194 | pathogenic | -0.099 | Destabilizing | 0.997 | D | 0.451 | neutral | None | None | None | None | N |
D/G | 0.1611 | likely_benign | 0.1567 | benign | -0.222 | Destabilizing | 0.92 | D | 0.357 | neutral | N | 0.433825552 | None | None | N |
D/H | 0.3481 | ambiguous | 0.3467 | ambiguous | 0.607 | Stabilizing | 0.988 | D | 0.359 | neutral | N | 0.426342219 | None | None | N |
D/I | 0.3879 | ambiguous | 0.396 | ambiguous | 0.143 | Stabilizing | 0.982 | D | 0.489 | neutral | None | None | None | None | N |
D/K | 0.3903 | ambiguous | 0.4139 | ambiguous | 0.27 | Stabilizing | 0.939 | D | 0.337 | neutral | None | None | None | None | N |
D/L | 0.4396 | ambiguous | 0.4331 | ambiguous | 0.143 | Stabilizing | 0.939 | D | 0.444 | neutral | None | None | None | None | N |
D/M | 0.5944 | likely_pathogenic | 0.5798 | pathogenic | -0.127 | Destabilizing | 0.999 | D | 0.449 | neutral | None | None | None | None | N |
D/N | 0.1091 | likely_benign | 0.1074 | benign | -0.031 | Destabilizing | 0.134 | N | 0.206 | neutral | N | 0.463167024 | None | None | N |
D/P | 0.6866 | likely_pathogenic | 0.7143 | pathogenic | 0.079 | Stabilizing | 0.997 | D | 0.403 | neutral | None | None | None | None | N |
D/Q | 0.3486 | ambiguous | 0.3474 | ambiguous | -0.019 | Destabilizing | 0.982 | D | 0.355 | neutral | None | None | None | None | N |
D/R | 0.4583 | ambiguous | 0.4721 | ambiguous | 0.604 | Stabilizing | 0.982 | D | 0.449 | neutral | None | None | None | None | N |
D/S | 0.1355 | likely_benign | 0.1329 | benign | -0.135 | Destabilizing | 0.759 | D | 0.387 | neutral | None | None | None | None | N |
D/T | 0.214 | likely_benign | 0.2214 | benign | -0.031 | Destabilizing | 0.079 | N | 0.174 | neutral | None | None | None | None | N |
D/V | 0.24 | likely_benign | 0.2502 | benign | 0.079 | Stabilizing | 0.92 | D | 0.442 | neutral | N | 0.420626968 | None | None | N |
D/W | 0.8815 | likely_pathogenic | 0.8742 | pathogenic | -0.019 | Destabilizing | 0.999 | D | 0.54 | neutral | None | None | None | None | N |
D/Y | 0.2897 | likely_benign | 0.2827 | benign | 0.131 | Stabilizing | 0.996 | D | 0.451 | neutral | N | 0.495644801 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.