Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31862 | 95809;95810;95811 | chr2:178545526;178545525;178545524 | chr2:179410253;179410252;179410251 |
N2AB | 30221 | 90886;90887;90888 | chr2:178545526;178545525;178545524 | chr2:179410253;179410252;179410251 |
N2A | 29294 | 88105;88106;88107 | chr2:178545526;178545525;178545524 | chr2:179410253;179410252;179410251 |
N2B | 22797 | 68614;68615;68616 | chr2:178545526;178545525;178545524 | chr2:179410253;179410252;179410251 |
Novex-1 | 22922 | 68989;68990;68991 | chr2:178545526;178545525;178545524 | chr2:179410253;179410252;179410251 |
Novex-2 | 22989 | 69190;69191;69192 | chr2:178545526;178545525;178545524 | chr2:179410253;179410252;179410251 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.09 | N | 0.212 | 0.15 | 0.469333501611 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0878 | likely_benign | 0.1027 | benign | -0.973 | Destabilizing | 0.09 | N | 0.212 | neutral | N | 0.398672828 | None | None | N |
V/C | 0.4096 | ambiguous | 0.4752 | ambiguous | -0.559 | Destabilizing | 0.944 | D | 0.256 | neutral | None | None | None | None | N |
V/D | 0.2718 | likely_benign | 0.2674 | benign | -0.181 | Destabilizing | 0.388 | N | 0.364 | neutral | None | None | None | None | N |
V/E | 0.2148 | likely_benign | 0.2237 | benign | -0.182 | Destabilizing | 0.324 | N | 0.31 | neutral | N | 0.420490895 | None | None | N |
V/F | 0.1422 | likely_benign | 0.1507 | benign | -0.703 | Destabilizing | 0.818 | D | 0.316 | neutral | None | None | None | None | N |
V/G | 0.1562 | likely_benign | 0.1691 | benign | -1.253 | Destabilizing | 0.324 | N | 0.326 | neutral | N | 0.436807142 | None | None | N |
V/H | 0.3143 | likely_benign | 0.3618 | ambiguous | -0.606 | Destabilizing | 0.981 | D | 0.317 | neutral | None | None | None | None | N |
V/I | 0.0618 | likely_benign | 0.0665 | benign | -0.324 | Destabilizing | 0.008 | N | 0.094 | neutral | None | None | None | None | N |
V/K | 0.1881 | likely_benign | 0.2136 | benign | -0.529 | Destabilizing | 0.388 | N | 0.305 | neutral | None | None | None | None | N |
V/L | 0.1008 | likely_benign | 0.1164 | benign | -0.324 | Destabilizing | 0.041 | N | 0.171 | neutral | N | 0.353017896 | None | None | N |
V/M | 0.0823 | likely_benign | 0.0956 | benign | -0.357 | Destabilizing | 0.773 | D | 0.329 | neutral | N | 0.46686069 | None | None | N |
V/N | 0.1346 | likely_benign | 0.1553 | benign | -0.367 | Destabilizing | 0.69 | D | 0.366 | neutral | None | None | None | None | N |
V/P | 0.1793 | likely_benign | 0.2172 | benign | -0.505 | Destabilizing | 0.818 | D | 0.346 | neutral | None | None | None | None | N |
V/Q | 0.1891 | likely_benign | 0.2148 | benign | -0.48 | Destabilizing | 0.818 | D | 0.334 | neutral | None | None | None | None | N |
V/R | 0.1758 | likely_benign | 0.1999 | benign | -0.112 | Destabilizing | 0.69 | D | 0.375 | neutral | None | None | None | None | N |
V/S | 0.1089 | likely_benign | 0.1224 | benign | -0.935 | Destabilizing | 0.116 | N | 0.267 | neutral | None | None | None | None | N |
V/T | 0.0713 | likely_benign | 0.0843 | benign | -0.816 | Destabilizing | None | N | 0.08 | neutral | None | None | None | None | N |
V/W | 0.5906 | likely_pathogenic | 0.6472 | pathogenic | -0.847 | Destabilizing | 0.981 | D | 0.351 | neutral | None | None | None | None | N |
V/Y | 0.3512 | ambiguous | 0.389 | ambiguous | -0.525 | Destabilizing | 0.818 | D | 0.299 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.