Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31868 | 95827;95828;95829 | chr2:178545508;178545507;178545506 | chr2:179410235;179410234;179410233 |
N2AB | 30227 | 90904;90905;90906 | chr2:178545508;178545507;178545506 | chr2:179410235;179410234;179410233 |
N2A | 29300 | 88123;88124;88125 | chr2:178545508;178545507;178545506 | chr2:179410235;179410234;179410233 |
N2B | 22803 | 68632;68633;68634 | chr2:178545508;178545507;178545506 | chr2:179410235;179410234;179410233 |
Novex-1 | 22928 | 69007;69008;69009 | chr2:178545508;178545507;178545506 | chr2:179410235;179410234;179410233 |
Novex-2 | 22995 | 69208;69209;69210 | chr2:178545508;178545507;178545506 | chr2:179410235;179410234;179410233 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | None | None | 0.996 | N | 0.797 | 0.299 | 0.509053020717 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
L/Q | rs1559138758 | None | 0.996 | N | 0.817 | 0.516 | 0.78423951252 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.56E-05 | None | 0 | None | 0 | 0 | 0 |
L/Q | rs1559138758 | None | 0.996 | N | 0.817 | 0.516 | 0.78423951252 | gnomAD-4.0.0 | 1.59163E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77285E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6798 | likely_pathogenic | 0.6905 | pathogenic | -2.203 | Highly Destabilizing | 0.972 | D | 0.599 | neutral | None | None | None | None | N |
L/C | 0.5258 | ambiguous | 0.5633 | ambiguous | -1.565 | Destabilizing | 0.999 | D | 0.774 | deleterious | None | None | None | None | N |
L/D | 0.9811 | likely_pathogenic | 0.9788 | pathogenic | -2.111 | Highly Destabilizing | 0.997 | D | 0.845 | deleterious | None | None | None | None | N |
L/E | 0.848 | likely_pathogenic | 0.841 | pathogenic | -1.925 | Destabilizing | 0.992 | D | 0.809 | deleterious | None | None | None | None | N |
L/F | 0.1884 | likely_benign | 0.1742 | benign | -1.29 | Destabilizing | 0.968 | D | 0.763 | deleterious | None | None | None | None | N |
L/G | 0.9101 | likely_pathogenic | 0.9098 | pathogenic | -2.664 | Highly Destabilizing | 0.983 | D | 0.76 | deleterious | None | None | None | None | N |
L/H | 0.5799 | likely_pathogenic | 0.569 | pathogenic | -1.71 | Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | N |
L/I | 0.1422 | likely_benign | 0.1379 | benign | -0.899 | Destabilizing | 0.972 | D | 0.605 | neutral | None | None | None | None | N |
L/K | 0.7093 | likely_pathogenic | 0.7167 | pathogenic | -1.794 | Destabilizing | 0.992 | D | 0.753 | deleterious | None | None | None | None | N |
L/M | 0.1203 | likely_benign | 0.1253 | benign | -0.861 | Destabilizing | 0.996 | D | 0.797 | deleterious | N | 0.51775087 | None | None | N |
L/N | 0.8808 | likely_pathogenic | 0.8799 | pathogenic | -2.108 | Highly Destabilizing | 0.997 | D | 0.846 | deleterious | None | None | None | None | N |
L/P | 0.9937 | likely_pathogenic | 0.9914 | pathogenic | -1.313 | Destabilizing | 0.996 | D | 0.844 | deleterious | N | 0.495642012 | None | None | N |
L/Q | 0.4305 | ambiguous | 0.432 | ambiguous | -2.014 | Highly Destabilizing | 0.996 | D | 0.817 | deleterious | N | 0.518444303 | None | None | N |
L/R | 0.6281 | likely_pathogenic | 0.6159 | pathogenic | -1.426 | Destabilizing | 0.989 | D | 0.808 | deleterious | N | 0.495135033 | None | None | N |
L/S | 0.8252 | likely_pathogenic | 0.8151 | pathogenic | -2.771 | Highly Destabilizing | 0.992 | D | 0.735 | prob.delet. | None | None | None | None | N |
L/T | 0.6973 | likely_pathogenic | 0.6828 | pathogenic | -2.437 | Highly Destabilizing | 0.992 | D | 0.715 | prob.delet. | None | None | None | None | N |
L/V | 0.1469 | likely_benign | 0.1424 | benign | -1.313 | Destabilizing | 0.963 | D | 0.587 | neutral | N | 0.447423993 | None | None | N |
L/W | 0.4665 | ambiguous | 0.4368 | ambiguous | -1.478 | Destabilizing | 0.11 | N | 0.589 | neutral | None | None | None | None | N |
L/Y | 0.4369 | ambiguous | 0.4484 | ambiguous | -1.227 | Destabilizing | 0.968 | D | 0.761 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.