Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31875 | 95848;95849;95850 | chr2:178545487;178545486;178545485 | chr2:179410214;179410213;179410212 |
N2AB | 30234 | 90925;90926;90927 | chr2:178545487;178545486;178545485 | chr2:179410214;179410213;179410212 |
N2A | 29307 | 88144;88145;88146 | chr2:178545487;178545486;178545485 | chr2:179410214;179410213;179410212 |
N2B | 22810 | 68653;68654;68655 | chr2:178545487;178545486;178545485 | chr2:179410214;179410213;179410212 |
Novex-1 | 22935 | 69028;69029;69030 | chr2:178545487;178545486;178545485 | chr2:179410214;179410213;179410212 |
Novex-2 | 23002 | 69229;69230;69231 | chr2:178545487;178545486;178545485 | chr2:179410214;179410213;179410212 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs371534086 | None | 0.999 | N | 0.695 | 0.433 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs371534086 | None | 0.999 | N | 0.695 | 0.433 | None | gnomAD-4.0.0 | 1.85935E-06 | None | None | None | None | N | None | 2.67008E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60128E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2701 | likely_benign | 0.2121 | benign | -0.429 | Destabilizing | 0.999 | D | 0.653 | neutral | N | 0.496586156 | None | None | N |
E/C | 0.9477 | likely_pathogenic | 0.9318 | pathogenic | 0.02 | Stabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
E/D | 0.3331 | likely_benign | 0.2783 | benign | -0.449 | Destabilizing | 0.999 | D | 0.579 | neutral | N | 0.490259961 | None | None | N |
E/F | 0.9554 | likely_pathogenic | 0.9353 | pathogenic | -0.434 | Destabilizing | 1.0 | D | 0.62 | neutral | None | None | None | None | N |
E/G | 0.4677 | ambiguous | 0.3843 | ambiguous | -0.642 | Destabilizing | 1.0 | D | 0.61 | neutral | N | 0.517011497 | None | None | N |
E/H | 0.8181 | likely_pathogenic | 0.7729 | pathogenic | -0.434 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
E/I | 0.6749 | likely_pathogenic | 0.578 | pathogenic | 0.101 | Stabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
E/K | 0.4155 | ambiguous | 0.3487 | ambiguous | 0.133 | Stabilizing | 0.999 | D | 0.695 | prob.neutral | N | 0.497639794 | None | None | N |
E/L | 0.7492 | likely_pathogenic | 0.6558 | pathogenic | 0.101 | Stabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | N |
E/M | 0.7746 | likely_pathogenic | 0.7042 | pathogenic | 0.34 | Stabilizing | 1.0 | D | 0.591 | neutral | None | None | None | None | N |
E/N | 0.5735 | likely_pathogenic | 0.499 | ambiguous | -0.047 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
E/P | 0.4961 | ambiguous | 0.4124 | ambiguous | -0.055 | Destabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | N |
E/Q | 0.2883 | likely_benign | 0.259 | benign | -0.029 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | N | 0.475180673 | None | None | N |
E/R | 0.5682 | likely_pathogenic | 0.5144 | ambiguous | 0.264 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/S | 0.4513 | ambiguous | 0.3866 | ambiguous | -0.25 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | N |
E/T | 0.5202 | ambiguous | 0.4337 | ambiguous | -0.086 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
E/V | 0.4488 | ambiguous | 0.3497 | ambiguous | -0.055 | Destabilizing | 1.0 | D | 0.623 | neutral | N | 0.505401702 | None | None | N |
E/W | 0.9833 | likely_pathogenic | 0.9743 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | N |
E/Y | 0.907 | likely_pathogenic | 0.8719 | pathogenic | -0.209 | Destabilizing | 1.0 | D | 0.604 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.