Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31889 | 95890;95891;95892 | chr2:178545445;178545444;178545443 | chr2:179410172;179410171;179410170 |
N2AB | 30248 | 90967;90968;90969 | chr2:178545445;178545444;178545443 | chr2:179410172;179410171;179410170 |
N2A | 29321 | 88186;88187;88188 | chr2:178545445;178545444;178545443 | chr2:179410172;179410171;179410170 |
N2B | 22824 | 68695;68696;68697 | chr2:178545445;178545444;178545443 | chr2:179410172;179410171;179410170 |
Novex-1 | 22949 | 69070;69071;69072 | chr2:178545445;178545444;178545443 | chr2:179410172;179410171;179410170 |
Novex-2 | 23016 | 69271;69272;69273 | chr2:178545445;178545444;178545443 | chr2:179410172;179410171;179410170 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1025105445 | None | 1.0 | N | 0.768 | 0.46 | 0.384252928164 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/T | rs1025105445 | None | 1.0 | N | 0.768 | 0.46 | 0.384252928164 | gnomAD-4.0.0 | 3.04476E-06 | None | None | None | None | I | None | 1.74709E-05 | 6.14931E-05 | None | 0 | 0 | None | 0 | 0 | 1.20492E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7672 | likely_pathogenic | 0.7452 | pathogenic | -0.881 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
A/D | 0.9712 | likely_pathogenic | 0.9735 | pathogenic | -0.758 | Destabilizing | 1.0 | D | 0.857 | deleterious | N | 0.518706564 | None | None | I |
A/E | 0.9102 | likely_pathogenic | 0.918 | pathogenic | -0.916 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
A/F | 0.7857 | likely_pathogenic | 0.7504 | pathogenic | -0.959 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
A/G | 0.4875 | ambiguous | 0.4986 | ambiguous | -0.329 | Destabilizing | 1.0 | D | 0.619 | neutral | N | 0.503614049 | None | None | I |
A/H | 0.9502 | likely_pathogenic | 0.9467 | pathogenic | -0.258 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
A/I | 0.6615 | likely_pathogenic | 0.7104 | pathogenic | -0.456 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
A/K | 0.9798 | likely_pathogenic | 0.984 | pathogenic | -0.709 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
A/L | 0.7095 | likely_pathogenic | 0.7274 | pathogenic | -0.456 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | I |
A/M | 0.691 | likely_pathogenic | 0.6991 | pathogenic | -0.562 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
A/N | 0.912 | likely_pathogenic | 0.9238 | pathogenic | -0.421 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
A/P | 0.9771 | likely_pathogenic | 0.9811 | pathogenic | -0.379 | Destabilizing | 1.0 | D | 0.8 | deleterious | D | 0.538585245 | None | None | I |
A/Q | 0.9088 | likely_pathogenic | 0.9122 | pathogenic | -0.726 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
A/R | 0.9433 | likely_pathogenic | 0.9501 | pathogenic | -0.174 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
A/S | 0.2617 | likely_benign | 0.2766 | benign | -0.576 | Destabilizing | 1.0 | D | 0.624 | neutral | N | 0.474535563 | None | None | I |
A/T | 0.5727 | likely_pathogenic | 0.605 | pathogenic | -0.664 | Destabilizing | 1.0 | D | 0.768 | deleterious | N | 0.508110727 | None | None | I |
A/V | 0.3948 | ambiguous | 0.4325 | ambiguous | -0.379 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | N | 0.492121707 | None | None | I |
A/W | 0.9777 | likely_pathogenic | 0.9773 | pathogenic | -1.056 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
A/Y | 0.9201 | likely_pathogenic | 0.908 | pathogenic | -0.742 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.