Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31893 | 95902;95903;95904 | chr2:178545433;178545432;178545431 | chr2:179410160;179410159;179410158 |
N2AB | 30252 | 90979;90980;90981 | chr2:178545433;178545432;178545431 | chr2:179410160;179410159;179410158 |
N2A | 29325 | 88198;88199;88200 | chr2:178545433;178545432;178545431 | chr2:179410160;179410159;179410158 |
N2B | 22828 | 68707;68708;68709 | chr2:178545433;178545432;178545431 | chr2:179410160;179410159;179410158 |
Novex-1 | 22953 | 69082;69083;69084 | chr2:178545433;178545432;178545431 | chr2:179410160;179410159;179410158 |
Novex-2 | 23020 | 69283;69284;69285 | chr2:178545433;178545432;178545431 | chr2:179410160;179410159;179410158 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1241275942 | 0.531 | 0.704 | N | 0.484 | 0.222 | 0.353974658523 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.02E-06 | 0 |
E/K | rs1241275942 | 0.531 | 0.704 | N | 0.484 | 0.222 | 0.353974658523 | gnomAD-4.0.0 | 3.23073E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.78987E-05 | None | 0 | 0 | 2.91688E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1176 | likely_benign | 0.11 | benign | -0.37 | Destabilizing | 0.134 | N | 0.24 | neutral | N | 0.497143524 | None | None | I |
E/C | 0.7503 | likely_pathogenic | 0.7271 | pathogenic | -0.016 | Destabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | I |
E/D | 0.1289 | likely_benign | 0.1231 | benign | -0.305 | Destabilizing | 0.826 | D | 0.471 | neutral | D | 0.523964766 | None | None | I |
E/F | 0.608 | likely_pathogenic | 0.568 | pathogenic | -0.288 | Destabilizing | 0.997 | D | 0.614 | neutral | None | None | None | None | I |
E/G | 0.1762 | likely_benign | 0.1625 | benign | -0.555 | Destabilizing | 0.852 | D | 0.557 | neutral | N | 0.482547279 | None | None | I |
E/H | 0.422 | ambiguous | 0.3885 | ambiguous | -0.029 | Destabilizing | 0.991 | D | 0.561 | neutral | None | None | None | None | I |
E/I | 0.1992 | likely_benign | 0.1778 | benign | 0.079 | Stabilizing | 0.991 | D | 0.619 | neutral | None | None | None | None | I |
E/K | 0.1141 | likely_benign | 0.0993 | benign | 0.34 | Stabilizing | 0.704 | D | 0.484 | neutral | N | 0.508360596 | None | None | I |
E/L | 0.2098 | likely_benign | 0.1933 | benign | 0.079 | Stabilizing | 0.939 | D | 0.625 | neutral | None | None | None | None | I |
E/M | 0.2891 | likely_benign | 0.2595 | benign | 0.183 | Stabilizing | 0.997 | D | 0.621 | neutral | None | None | None | None | I |
E/N | 0.2306 | likely_benign | 0.2083 | benign | 0.046 | Stabilizing | 0.969 | D | 0.597 | neutral | None | None | None | None | I |
E/P | 0.2912 | likely_benign | 0.2844 | benign | -0.051 | Destabilizing | 0.046 | N | 0.321 | neutral | None | None | None | None | I |
E/Q | 0.1132 | likely_benign | 0.1054 | benign | 0.075 | Stabilizing | 0.31 | N | 0.124 | neutral | N | 0.491390988 | None | None | I |
E/R | 0.2143 | likely_benign | 0.1948 | benign | 0.531 | Stabilizing | 0.939 | D | 0.595 | neutral | None | None | None | None | I |
E/S | 0.171 | likely_benign | 0.1597 | benign | -0.117 | Destabilizing | 0.759 | D | 0.471 | neutral | None | None | None | None | I |
E/T | 0.1841 | likely_benign | 0.169 | benign | 0.035 | Stabilizing | 0.939 | D | 0.571 | neutral | None | None | None | None | I |
E/V | 0.1317 | likely_benign | 0.1208 | benign | -0.051 | Destabilizing | 0.92 | D | 0.615 | neutral | N | 0.483258522 | None | None | I |
E/W | 0.8608 | likely_pathogenic | 0.8375 | pathogenic | -0.148 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | I |
E/Y | 0.4927 | ambiguous | 0.4542 | ambiguous | -0.047 | Destabilizing | 0.997 | D | 0.623 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.