Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31896 | 95911;95912;95913 | chr2:178545424;178545423;178545422 | chr2:179410151;179410150;179410149 |
N2AB | 30255 | 90988;90989;90990 | chr2:178545424;178545423;178545422 | chr2:179410151;179410150;179410149 |
N2A | 29328 | 88207;88208;88209 | chr2:178545424;178545423;178545422 | chr2:179410151;179410150;179410149 |
N2B | 22831 | 68716;68717;68718 | chr2:178545424;178545423;178545422 | chr2:179410151;179410150;179410149 |
Novex-1 | 22956 | 69091;69092;69093 | chr2:178545424;178545423;178545422 | chr2:179410151;179410150;179410149 |
Novex-2 | 23023 | 69292;69293;69294 | chr2:178545424;178545423;178545422 | chr2:179410151;179410150;179410149 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs745365163 | 0.554 | 0.256 | N | 0.483 | 0.207 | 0.384584525793 | gnomAD-2.1.1 | 5.12E-05 | None | None | None | None | N | None | 0 | 2.88E-05 | None | 0 | 4.63058E-04 | None | 1.02683E-04 | None | 0 | 8E-06 | 0 |
E/K | rs745365163 | 0.554 | 0.256 | N | 0.483 | 0.207 | 0.384584525793 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 3.861E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs745365163 | 0.554 | 0.256 | N | 0.483 | 0.207 | 0.384584525793 | gnomAD-4.0.0 | 1.68914E-05 | None | None | None | None | N | None | 0 | 1.68976E-05 | None | 0 | 2.24336E-04 | None | 0 | 0 | 3.4208E-06 | 1.22793E-04 | 1.61928E-05 |
E/V | rs774355988 | 0.003 | 0.303 | N | 0.595 | 0.146 | 0.494838880905 | gnomAD-2.1.1 | 5.37E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.6E-05 | None | 4.10341E-04 | None | 0 | 0 | 0 |
E/V | rs774355988 | 0.003 | 0.303 | N | 0.595 | 0.146 | 0.494838880905 | gnomAD-4.0.0 | 2.00499E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.53807E-05 | None | 0 | 0 | 0 | 3.30033E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1004 | likely_benign | 0.1042 | benign | -0.208 | Destabilizing | 0.012 | N | 0.483 | neutral | N | 0.49211892 | None | None | N |
E/C | 0.6738 | likely_pathogenic | 0.7062 | pathogenic | -0.097 | Destabilizing | 0.869 | D | 0.66 | prob.neutral | None | None | None | None | N |
E/D | 0.0849 | likely_benign | 0.0925 | benign | -0.261 | Destabilizing | None | N | 0.192 | neutral | N | 0.44973358 | None | None | N |
E/F | 0.5833 | likely_pathogenic | 0.5966 | pathogenic | -0.076 | Destabilizing | 0.637 | D | 0.643 | neutral | None | None | None | None | N |
E/G | 0.1388 | likely_benign | 0.1378 | benign | -0.374 | Destabilizing | None | N | 0.381 | neutral | D | 0.522231183 | None | None | N |
E/H | 0.3726 | ambiguous | 0.3858 | ambiguous | 0.373 | Stabilizing | 0.637 | D | 0.509 | neutral | None | None | None | None | N |
E/I | 0.22 | likely_benign | 0.2354 | benign | 0.185 | Stabilizing | 0.366 | N | 0.647 | neutral | None | None | None | None | N |
E/K | 0.1123 | likely_benign | 0.1117 | benign | 0.467 | Stabilizing | 0.256 | N | 0.483 | neutral | N | 0.52153775 | None | None | N |
E/L | 0.2201 | likely_benign | 0.2346 | benign | 0.185 | Stabilizing | 0.366 | N | 0.634 | neutral | None | None | None | None | N |
E/M | 0.3031 | likely_benign | 0.3079 | benign | 0.117 | Stabilizing | 0.869 | D | 0.621 | neutral | None | None | None | None | N |
E/N | 0.1685 | likely_benign | 0.187 | benign | 0.076 | Stabilizing | 0.039 | N | 0.433 | neutral | None | None | None | None | N |
E/P | 0.234 | likely_benign | 0.2711 | benign | 0.073 | Stabilizing | 0.366 | N | 0.585 | neutral | None | None | None | None | N |
E/Q | 0.1324 | likely_benign | 0.1311 | benign | 0.119 | Stabilizing | 0.135 | N | 0.597 | neutral | N | 0.483366151 | None | None | N |
E/R | 0.2085 | likely_benign | 0.2074 | benign | 0.703 | Stabilizing | 0.366 | N | 0.553 | neutral | None | None | None | None | N |
E/S | 0.1453 | likely_benign | 0.1514 | benign | -0.053 | Destabilizing | 0.039 | N | 0.459 | neutral | None | None | None | None | N |
E/T | 0.1651 | likely_benign | 0.1723 | benign | 0.094 | Stabilizing | 0.075 | N | 0.568 | neutral | None | None | None | None | N |
E/V | 0.1317 | likely_benign | 0.1396 | benign | 0.073 | Stabilizing | 0.303 | N | 0.595 | neutral | N | 0.503298706 | None | None | N |
E/W | 0.8114 | likely_pathogenic | 0.811 | pathogenic | 0.058 | Stabilizing | 0.869 | D | 0.698 | prob.delet. | None | None | None | None | N |
E/Y | 0.4548 | ambiguous | 0.4785 | ambiguous | 0.17 | Stabilizing | 0.637 | D | 0.618 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.