Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31905 | 95938;95939;95940 | chr2:178545397;178545396;178545395 | chr2:179410124;179410123;179410122 |
N2AB | 30264 | 91015;91016;91017 | chr2:178545397;178545396;178545395 | chr2:179410124;179410123;179410122 |
N2A | 29337 | 88234;88235;88236 | chr2:178545397;178545396;178545395 | chr2:179410124;179410123;179410122 |
N2B | 22840 | 68743;68744;68745 | chr2:178545397;178545396;178545395 | chr2:179410124;179410123;179410122 |
Novex-1 | 22965 | 69118;69119;69120 | chr2:178545397;178545396;178545395 | chr2:179410124;179410123;179410122 |
Novex-2 | 23032 | 69319;69320;69321 | chr2:178545397;178545396;178545395 | chr2:179410124;179410123;179410122 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs777381153 | 0.395 | 0.993 | N | 0.628 | 0.229 | 0.216624796971 | gnomAD-2.1.1 | 4.5E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 4.13E-05 | None | 0 | 0 | 0 |
E/Q | rs777381153 | 0.395 | 0.993 | N | 0.628 | 0.229 | 0.216624796971 | gnomAD-4.0.0 | 2.11808E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.78444E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.211 | likely_benign | 0.2264 | benign | -0.199 | Destabilizing | 0.976 | D | 0.72 | deleterious | N | 0.445306408 | None | None | N |
E/C | 0.8658 | likely_pathogenic | 0.8952 | pathogenic | -0.199 | Destabilizing | 1.0 | D | 0.721 | deleterious | None | None | None | None | N |
E/D | 0.0983 | likely_benign | 0.1154 | benign | -0.333 | Destabilizing | 0.026 | N | 0.388 | neutral | N | 0.334677278 | None | None | N |
E/F | 0.7711 | likely_pathogenic | 0.8033 | pathogenic | -0.117 | Destabilizing | 1.0 | D | 0.579 | neutral | None | None | None | None | N |
E/G | 0.2537 | likely_benign | 0.2863 | benign | -0.356 | Destabilizing | 0.953 | D | 0.477 | neutral | N | 0.467201833 | None | None | N |
E/H | 0.645 | likely_pathogenic | 0.6738 | pathogenic | 0.376 | Stabilizing | 1.0 | D | 0.65 | prob.neutral | None | None | None | None | N |
E/I | 0.4135 | ambiguous | 0.4345 | ambiguous | 0.169 | Stabilizing | 0.998 | D | 0.617 | neutral | None | None | None | None | N |
E/K | 0.3446 | ambiguous | 0.3558 | ambiguous | 0.363 | Stabilizing | 0.953 | D | 0.709 | prob.delet. | N | 0.476994752 | None | None | N |
E/L | 0.4297 | ambiguous | 0.4478 | ambiguous | 0.169 | Stabilizing | 0.995 | D | 0.638 | neutral | None | None | None | None | N |
E/M | 0.5102 | ambiguous | 0.5243 | ambiguous | 0.022 | Stabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
E/N | 0.3022 | likely_benign | 0.3328 | benign | 0.042 | Stabilizing | 0.99 | D | 0.685 | prob.delet. | None | None | None | None | N |
E/P | 0.4861 | ambiguous | 0.5344 | ambiguous | 0.065 | Stabilizing | 0.998 | D | 0.623 | neutral | None | None | None | None | N |
E/Q | 0.2307 | likely_benign | 0.2352 | benign | 0.066 | Stabilizing | 0.993 | D | 0.628 | neutral | N | 0.493233641 | None | None | N |
E/R | 0.5045 | ambiguous | 0.5407 | ambiguous | 0.634 | Stabilizing | 0.995 | D | 0.689 | prob.delet. | None | None | None | None | N |
E/S | 0.2669 | likely_benign | 0.2954 | benign | -0.099 | Destabilizing | 0.964 | D | 0.716 | prob.delet. | None | None | None | None | N |
E/T | 0.3161 | likely_benign | 0.3455 | ambiguous | 0.035 | Stabilizing | 0.995 | D | 0.654 | prob.neutral | None | None | None | None | N |
E/V | 0.246 | likely_benign | 0.258 | benign | 0.065 | Stabilizing | 0.998 | D | 0.574 | neutral | N | 0.466335041 | None | None | N |
E/W | 0.927 | likely_pathogenic | 0.938 | pathogenic | -0.003 | Destabilizing | 1.0 | D | 0.731 | deleterious | None | None | None | None | N |
E/Y | 0.6264 | likely_pathogenic | 0.6771 | pathogenic | 0.122 | Stabilizing | 1.0 | D | 0.511 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.