Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3191595968;95969;95970 chr2:178544486;178544485;178544484chr2:179409213;179409212;179409211
N2AB3027491045;91046;91047 chr2:178544486;178544485;178544484chr2:179409213;179409212;179409211
N2A2934788264;88265;88266 chr2:178544486;178544485;178544484chr2:179409213;179409212;179409211
N2B2285068773;68774;68775 chr2:178544486;178544485;178544484chr2:179409213;179409212;179409211
Novex-12297569148;69149;69150 chr2:178544486;178544485;178544484chr2:179409213;179409212;179409211
Novex-22304269349;69350;69351 chr2:178544486;178544485;178544484chr2:179409213;179409212;179409211
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: A
  • RefSeq wild type transcript codon: GCT
  • RefSeq wild type template codon: CGA
  • Domain: Fn3-121
  • Domain position: 7
  • Structural Position: 7
  • Q(SASA): 0.58
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
A/S rs1490243211 -0.403 None N 0.212 0.104 None gnomAD-2.1.1 4.04E-06 None None None None I None 0 0 None 0 0 None 0 None 0 0 1.66945E-04
A/S rs1490243211 -0.403 None N 0.212 0.104 None gnomAD-3.1.2 2.63E-05 None None None None I None 0 2.61849E-04 0 0 0 None 0 0 0 0 0
A/S rs1490243211 -0.403 None N 0.212 0.104 None gnomAD-4.0.0 6.85325E-06 None None None None I None 0 1.00164E-04 None 0 0 None 0 0 4.2642E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
A/C 0.3049 likely_benign 0.3256 benign -1.156 Destabilizing 0.824 D 0.437 neutral None None None None I
A/D 0.3427 ambiguous 0.3354 benign -1.295 Destabilizing 0.188 N 0.464 neutral N 0.43237997 None None I
A/E 0.2683 likely_benign 0.2499 benign -1.307 Destabilizing 0.081 N 0.447 neutral None None None None I
A/F 0.2169 likely_benign 0.226 benign -1.133 Destabilizing 0.38 N 0.457 neutral None None None None I
A/G 0.1433 likely_benign 0.1472 benign -1.324 Destabilizing 0.062 N 0.311 neutral N 0.458507778 None None I
A/H 0.3552 ambiguous 0.3548 ambiguous -1.42 Destabilizing 0.824 D 0.387 neutral None None None None I
A/I 0.1245 likely_benign 0.1267 benign -0.476 Destabilizing None N 0.215 neutral None None None None I
A/K 0.3478 ambiguous 0.3205 benign -1.19 Destabilizing 0.081 N 0.444 neutral None None None None I
A/L 0.1044 likely_benign 0.1126 benign -0.476 Destabilizing 0.016 N 0.423 neutral None None None None I
A/M 0.1368 likely_benign 0.1429 benign -0.488 Destabilizing 0.016 N 0.434 neutral None None None None I
A/N 0.1987 likely_benign 0.2146 benign -0.997 Destabilizing 0.235 N 0.459 neutral None None None None I
A/P 0.1275 likely_benign 0.106 benign -0.63 Destabilizing 0.317 N 0.499 neutral N 0.438596653 None None I
A/Q 0.2613 likely_benign 0.2528 benign -1.152 Destabilizing 0.38 N 0.469 neutral None None None None I
A/R 0.3424 ambiguous 0.3133 benign -0.886 Destabilizing 0.38 N 0.502 neutral None None None None I
A/S 0.0857 likely_benign 0.0923 benign -1.398 Destabilizing None N 0.212 neutral N 0.440404807 None None I
A/T 0.0769 likely_benign 0.0768 benign -1.312 Destabilizing 0.002 N 0.257 neutral N 0.465089821 None None I
A/V 0.0805 likely_benign 0.0805 benign -0.63 Destabilizing None N 0.085 neutral N 0.493257857 None None I
A/W 0.633 likely_pathogenic 0.6404 pathogenic -1.447 Destabilizing 0.935 D 0.5 neutral None None None None I
A/Y 0.3096 likely_benign 0.3272 benign -1.044 Destabilizing 0.555 D 0.44 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.