Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31915 | 95968;95969;95970 | chr2:178544486;178544485;178544484 | chr2:179409213;179409212;179409211 |
N2AB | 30274 | 91045;91046;91047 | chr2:178544486;178544485;178544484 | chr2:179409213;179409212;179409211 |
N2A | 29347 | 88264;88265;88266 | chr2:178544486;178544485;178544484 | chr2:179409213;179409212;179409211 |
N2B | 22850 | 68773;68774;68775 | chr2:178544486;178544485;178544484 | chr2:179409213;179409212;179409211 |
Novex-1 | 22975 | 69148;69149;69150 | chr2:178544486;178544485;178544484 | chr2:179409213;179409212;179409211 |
Novex-2 | 23042 | 69349;69350;69351 | chr2:178544486;178544485;178544484 | chr2:179409213;179409212;179409211 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs1490243211 | -0.403 | None | N | 0.212 | 0.104 | None | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66945E-04 |
A/S | rs1490243211 | -0.403 | None | N | 0.212 | 0.104 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | I | None | 0 | 2.61849E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/S | rs1490243211 | -0.403 | None | N | 0.212 | 0.104 | None | gnomAD-4.0.0 | 6.85325E-06 | None | None | None | None | I | None | 0 | 1.00164E-04 | None | 0 | 0 | None | 0 | 0 | 4.2642E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3049 | likely_benign | 0.3256 | benign | -1.156 | Destabilizing | 0.824 | D | 0.437 | neutral | None | None | None | None | I |
A/D | 0.3427 | ambiguous | 0.3354 | benign | -1.295 | Destabilizing | 0.188 | N | 0.464 | neutral | N | 0.43237997 | None | None | I |
A/E | 0.2683 | likely_benign | 0.2499 | benign | -1.307 | Destabilizing | 0.081 | N | 0.447 | neutral | None | None | None | None | I |
A/F | 0.2169 | likely_benign | 0.226 | benign | -1.133 | Destabilizing | 0.38 | N | 0.457 | neutral | None | None | None | None | I |
A/G | 0.1433 | likely_benign | 0.1472 | benign | -1.324 | Destabilizing | 0.062 | N | 0.311 | neutral | N | 0.458507778 | None | None | I |
A/H | 0.3552 | ambiguous | 0.3548 | ambiguous | -1.42 | Destabilizing | 0.824 | D | 0.387 | neutral | None | None | None | None | I |
A/I | 0.1245 | likely_benign | 0.1267 | benign | -0.476 | Destabilizing | None | N | 0.215 | neutral | None | None | None | None | I |
A/K | 0.3478 | ambiguous | 0.3205 | benign | -1.19 | Destabilizing | 0.081 | N | 0.444 | neutral | None | None | None | None | I |
A/L | 0.1044 | likely_benign | 0.1126 | benign | -0.476 | Destabilizing | 0.016 | N | 0.423 | neutral | None | None | None | None | I |
A/M | 0.1368 | likely_benign | 0.1429 | benign | -0.488 | Destabilizing | 0.016 | N | 0.434 | neutral | None | None | None | None | I |
A/N | 0.1987 | likely_benign | 0.2146 | benign | -0.997 | Destabilizing | 0.235 | N | 0.459 | neutral | None | None | None | None | I |
A/P | 0.1275 | likely_benign | 0.106 | benign | -0.63 | Destabilizing | 0.317 | N | 0.499 | neutral | N | 0.438596653 | None | None | I |
A/Q | 0.2613 | likely_benign | 0.2528 | benign | -1.152 | Destabilizing | 0.38 | N | 0.469 | neutral | None | None | None | None | I |
A/R | 0.3424 | ambiguous | 0.3133 | benign | -0.886 | Destabilizing | 0.38 | N | 0.502 | neutral | None | None | None | None | I |
A/S | 0.0857 | likely_benign | 0.0923 | benign | -1.398 | Destabilizing | None | N | 0.212 | neutral | N | 0.440404807 | None | None | I |
A/T | 0.0769 | likely_benign | 0.0768 | benign | -1.312 | Destabilizing | 0.002 | N | 0.257 | neutral | N | 0.465089821 | None | None | I |
A/V | 0.0805 | likely_benign | 0.0805 | benign | -0.63 | Destabilizing | None | N | 0.085 | neutral | N | 0.493257857 | None | None | I |
A/W | 0.633 | likely_pathogenic | 0.6404 | pathogenic | -1.447 | Destabilizing | 0.935 | D | 0.5 | neutral | None | None | None | None | I |
A/Y | 0.3096 | likely_benign | 0.3272 | benign | -1.044 | Destabilizing | 0.555 | D | 0.44 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.