Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31924 | 95995;95996;95997 | chr2:178544459;178544458;178544457 | chr2:179409186;179409185;179409184 |
N2AB | 30283 | 91072;91073;91074 | chr2:178544459;178544458;178544457 | chr2:179409186;179409185;179409184 |
N2A | 29356 | 88291;88292;88293 | chr2:178544459;178544458;178544457 | chr2:179409186;179409185;179409184 |
N2B | 22859 | 68800;68801;68802 | chr2:178544459;178544458;178544457 | chr2:179409186;179409185;179409184 |
Novex-1 | 22984 | 69175;69176;69177 | chr2:178544459;178544458;178544457 | chr2:179409186;179409185;179409184 |
Novex-2 | 23051 | 69376;69377;69378 | chr2:178544459;178544458;178544457 | chr2:179409186;179409185;179409184 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs747894883 | -0.385 | 0.055 | N | 0.189 | 0.096 | 0.277317399466 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
H/Q | rs747894883 | -0.385 | 0.055 | N | 0.189 | 0.096 | 0.277317399466 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
H/Q | rs747894883 | -0.385 | 0.055 | N | 0.189 | 0.096 | 0.277317399466 | gnomAD-4.0.0 | 3.85105E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.20298E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2004 | likely_benign | 0.1639 | benign | 0.016 | Stabilizing | 0.007 | N | 0.249 | neutral | None | None | None | None | N |
H/C | 0.1335 | likely_benign | 0.1222 | benign | 0.618 | Stabilizing | 0.628 | D | 0.303 | neutral | None | None | None | None | N |
H/D | 0.1404 | likely_benign | 0.1239 | benign | 0.15 | Stabilizing | 0.055 | N | 0.279 | neutral | N | 0.411311264 | None | None | N |
H/E | 0.2041 | likely_benign | 0.1764 | benign | 0.178 | Stabilizing | 0.016 | N | 0.187 | neutral | None | None | None | None | N |
H/F | 0.2406 | likely_benign | 0.1895 | benign | 0.573 | Stabilizing | None | N | 0.211 | neutral | None | None | None | None | N |
H/G | 0.1787 | likely_benign | 0.1653 | benign | -0.279 | Destabilizing | 0.016 | N | 0.245 | neutral | None | None | None | None | N |
H/I | 0.3316 | likely_benign | 0.2687 | benign | 0.774 | Stabilizing | 0.038 | N | 0.412 | neutral | None | None | None | None | N |
H/K | 0.1497 | likely_benign | 0.1316 | benign | 0.051 | Stabilizing | None | N | 0.147 | neutral | None | None | None | None | N |
H/L | 0.1277 | likely_benign | 0.1118 | benign | 0.774 | Stabilizing | 0.012 | N | 0.273 | neutral | N | 0.474976409 | None | None | N |
H/M | 0.3345 | likely_benign | 0.2912 | benign | 0.663 | Stabilizing | 0.356 | N | 0.307 | neutral | None | None | None | None | N |
H/N | 0.0691 | likely_benign | 0.0664 | benign | 0.214 | Stabilizing | 0.024 | N | 0.15 | neutral | N | 0.392570788 | None | None | N |
H/P | 0.5518 | ambiguous | 0.5014 | ambiguous | 0.547 | Stabilizing | 0.106 | N | 0.404 | neutral | N | 0.492121707 | None | None | N |
H/Q | 0.1088 | likely_benign | 0.1025 | benign | 0.306 | Stabilizing | 0.055 | N | 0.189 | neutral | N | 0.475440101 | None | None | N |
H/R | 0.0799 | likely_benign | 0.0732 | benign | -0.451 | Destabilizing | None | N | 0.055 | neutral | N | 0.43434284 | None | None | N |
H/S | 0.1253 | likely_benign | 0.1095 | benign | 0.192 | Stabilizing | None | N | 0.145 | neutral | None | None | None | None | N |
H/T | 0.1261 | likely_benign | 0.1064 | benign | 0.318 | Stabilizing | None | N | 0.158 | neutral | None | None | None | None | N |
H/V | 0.2598 | likely_benign | 0.2104 | benign | 0.547 | Stabilizing | 0.016 | N | 0.269 | neutral | None | None | None | None | N |
H/W | 0.3203 | likely_benign | 0.2786 | benign | 0.612 | Stabilizing | 0.356 | N | 0.293 | neutral | None | None | None | None | N |
H/Y | 0.0946 | likely_benign | 0.0765 | benign | 0.938 | Stabilizing | None | N | 0.1 | neutral | N | 0.470861 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.