Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31925 | 95998;95999;96000 | chr2:178544456;178544455;178544454 | chr2:179409183;179409182;179409181 |
N2AB | 30284 | 91075;91076;91077 | chr2:178544456;178544455;178544454 | chr2:179409183;179409182;179409181 |
N2A | 29357 | 88294;88295;88296 | chr2:178544456;178544455;178544454 | chr2:179409183;179409182;179409181 |
N2B | 22860 | 68803;68804;68805 | chr2:178544456;178544455;178544454 | chr2:179409183;179409182;179409181 |
Novex-1 | 22985 | 69178;69179;69180 | chr2:178544456;178544455;178544454 | chr2:179409183;179409182;179409181 |
Novex-2 | 23052 | 69379;69380;69381 | chr2:178544456;178544455;178544454 | chr2:179409183;179409182;179409181 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 1.0 | N | 0.833 | 0.537 | 0.498896430806 | gnomAD-4.0.0 | 6.84393E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65684E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1888 | likely_benign | 0.2116 | benign | -0.447 | Destabilizing | 0.998 | D | 0.447 | neutral | None | None | None | None | N |
S/C | 0.1764 | likely_benign | 0.1936 | benign | -0.953 | Destabilizing | 1.0 | D | 0.789 | deleterious | N | 0.496271712 | None | None | N |
S/D | 0.8639 | likely_pathogenic | 0.8467 | pathogenic | -2.058 | Highly Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | N |
S/E | 0.9125 | likely_pathogenic | 0.9066 | pathogenic | -1.976 | Destabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | N |
S/F | 0.5517 | ambiguous | 0.5123 | ambiguous | -0.79 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
S/G | 0.226 | likely_benign | 0.2476 | benign | -0.694 | Destabilizing | 0.999 | D | 0.506 | neutral | N | 0.494181344 | None | None | N |
S/H | 0.6398 | likely_pathogenic | 0.6238 | pathogenic | -1.255 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
S/I | 0.6997 | likely_pathogenic | 0.639 | pathogenic | 0.115 | Stabilizing | 1.0 | D | 0.843 | deleterious | D | 0.542760117 | None | None | N |
S/K | 0.9507 | likely_pathogenic | 0.9492 | pathogenic | -0.573 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
S/L | 0.3456 | ambiguous | 0.319 | benign | 0.115 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
S/M | 0.445 | ambiguous | 0.4364 | ambiguous | 0.138 | Stabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
S/N | 0.4573 | ambiguous | 0.4537 | ambiguous | -1.145 | Destabilizing | 0.999 | D | 0.601 | neutral | N | 0.482900717 | None | None | N |
S/P | 0.9937 | likely_pathogenic | 0.9902 | pathogenic | -0.04 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
S/Q | 0.8312 | likely_pathogenic | 0.8292 | pathogenic | -1.256 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
S/R | 0.918 | likely_pathogenic | 0.9108 | pathogenic | -0.57 | Destabilizing | 1.0 | D | 0.833 | deleterious | N | 0.499194547 | None | None | N |
S/T | 0.1103 | likely_benign | 0.1087 | benign | -0.773 | Destabilizing | 0.999 | D | 0.503 | neutral | N | 0.494282151 | None | None | N |
S/V | 0.6013 | likely_pathogenic | 0.5661 | pathogenic | -0.04 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
S/W | 0.7629 | likely_pathogenic | 0.7036 | pathogenic | -1.034 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
S/Y | 0.5078 | ambiguous | 0.4535 | ambiguous | -0.559 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.