Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31926 | 96001;96002;96003 | chr2:178544453;178544452;178544451 | chr2:179409180;179409179;179409178 |
N2AB | 30285 | 91078;91079;91080 | chr2:178544453;178544452;178544451 | chr2:179409180;179409179;179409178 |
N2A | 29358 | 88297;88298;88299 | chr2:178544453;178544452;178544451 | chr2:179409180;179409179;179409178 |
N2B | 22861 | 68806;68807;68808 | chr2:178544453;178544452;178544451 | chr2:179409180;179409179;179409178 |
Novex-1 | 22986 | 69181;69182;69183 | chr2:178544453;178544452;178544451 | chr2:179409180;179409179;179409178 |
Novex-2 | 23053 | 69382;69383;69384 | chr2:178544453;178544452;178544451 | chr2:179409180;179409179;179409178 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 1.0 | N | 0.803 | 0.554 | 0.709726528599 | gnomAD-4.0.0 | 1.5921E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86053E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7647 | likely_pathogenic | 0.7715 | pathogenic | -2.96 | Highly Destabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | N |
I/C | 0.8772 | likely_pathogenic | 0.8696 | pathogenic | -2.865 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
I/D | 0.9985 | likely_pathogenic | 0.9979 | pathogenic | -3.398 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
I/E | 0.996 | likely_pathogenic | 0.9945 | pathogenic | -3.106 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
I/F | 0.6975 | likely_pathogenic | 0.6228 | pathogenic | -1.833 | Destabilizing | 1.0 | D | 0.798 | deleterious | D | 0.524580842 | None | None | N |
I/G | 0.9833 | likely_pathogenic | 0.9805 | pathogenic | -3.543 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
I/H | 0.9924 | likely_pathogenic | 0.987 | pathogenic | -3.044 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
I/K | 0.9897 | likely_pathogenic | 0.9837 | pathogenic | -2.263 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
I/L | 0.2907 | likely_benign | 0.2581 | benign | -1.221 | Destabilizing | 0.993 | D | 0.338 | neutral | N | 0.461043864 | None | None | N |
I/M | 0.3351 | likely_benign | 0.3153 | benign | -1.707 | Destabilizing | 1.0 | D | 0.773 | deleterious | N | 0.46805433 | None | None | N |
I/N | 0.9768 | likely_pathogenic | 0.9687 | pathogenic | -2.853 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | N | 0.517647061 | None | None | N |
I/P | 0.9965 | likely_pathogenic | 0.9951 | pathogenic | -1.789 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
I/Q | 0.9896 | likely_pathogenic | 0.9847 | pathogenic | -2.589 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
I/R | 0.9809 | likely_pathogenic | 0.9677 | pathogenic | -2.165 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
I/S | 0.9298 | likely_pathogenic | 0.9177 | pathogenic | -3.545 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | N | 0.517140082 | None | None | N |
I/T | 0.8924 | likely_pathogenic | 0.8864 | pathogenic | -3.086 | Highly Destabilizing | 1.0 | D | 0.803 | deleterious | N | 0.490388547 | None | None | N |
I/V | 0.08 | likely_benign | 0.0803 | benign | -1.789 | Destabilizing | 0.993 | D | 0.273 | neutral | N | 0.412543415 | None | None | N |
I/W | 0.9941 | likely_pathogenic | 0.9903 | pathogenic | -2.106 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
I/Y | 0.9672 | likely_pathogenic | 0.9467 | pathogenic | -1.934 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.