Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31931 | 96016;96017;96018 | chr2:178544438;178544437;178544436 | chr2:179409165;179409164;179409163 |
N2AB | 30290 | 91093;91094;91095 | chr2:178544438;178544437;178544436 | chr2:179409165;179409164;179409163 |
N2A | 29363 | 88312;88313;88314 | chr2:178544438;178544437;178544436 | chr2:179409165;179409164;179409163 |
N2B | 22866 | 68821;68822;68823 | chr2:178544438;178544437;178544436 | chr2:179409165;179409164;179409163 |
Novex-1 | 22991 | 69196;69197;69198 | chr2:178544438;178544437;178544436 | chr2:179409165;179409164;179409163 |
Novex-2 | 23058 | 69397;69398;69399 | chr2:178544438;178544437;178544436 | chr2:179409165;179409164;179409163 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.982 | N | 0.619 | 0.304 | 0.425148423609 | gnomAD-4.0.0 | 2.73702E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69863E-06 | 0 | 1.65651E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0907 | likely_benign | 0.088 | benign | -1.01 | Destabilizing | 0.76 | D | 0.387 | neutral | N | 0.464321817 | None | None | I |
T/C | 0.3668 | ambiguous | 0.3757 | ambiguous | -0.632 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | I |
T/D | 0.4699 | ambiguous | 0.3988 | ambiguous | -0.583 | Destabilizing | 0.986 | D | 0.755 | deleterious | None | None | None | None | I |
T/E | 0.3768 | ambiguous | 0.3111 | benign | -0.527 | Destabilizing | 0.986 | D | 0.76 | deleterious | None | None | None | None | I |
T/F | 0.3388 | likely_benign | 0.3123 | benign | -0.939 | Destabilizing | 0.998 | D | 0.796 | deleterious | None | None | None | None | I |
T/G | 0.1543 | likely_benign | 0.1608 | benign | -1.331 | Destabilizing | 0.91 | D | 0.642 | neutral | None | None | None | None | I |
T/H | 0.3052 | likely_benign | 0.2723 | benign | -1.603 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | I |
T/I | 0.2316 | likely_benign | 0.2211 | benign | -0.223 | Destabilizing | 0.991 | D | 0.777 | deleterious | N | 0.472840496 | None | None | I |
T/K | 0.2661 | likely_benign | 0.215 | benign | -0.87 | Destabilizing | 0.986 | D | 0.761 | deleterious | None | None | None | None | I |
T/L | 0.1152 | likely_benign | 0.1078 | benign | -0.223 | Destabilizing | 0.953 | D | 0.641 | neutral | None | None | None | None | I |
T/M | 0.0931 | likely_benign | 0.0876 | benign | 0.042 | Stabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | I |
T/N | 0.1123 | likely_benign | 0.1051 | benign | -0.993 | Destabilizing | 0.982 | D | 0.619 | neutral | N | 0.492084421 | None | None | I |
T/P | 0.2308 | likely_benign | 0.1894 | benign | -0.452 | Destabilizing | 0.991 | D | 0.778 | deleterious | N | 0.479841935 | None | None | I |
T/Q | 0.2374 | likely_benign | 0.2059 | benign | -1.038 | Destabilizing | 0.993 | D | 0.783 | deleterious | None | None | None | None | I |
T/R | 0.2585 | likely_benign | 0.1935 | benign | -0.744 | Destabilizing | 0.986 | D | 0.781 | deleterious | None | None | None | None | I |
T/S | 0.0948 | likely_benign | 0.0946 | benign | -1.258 | Destabilizing | 0.17 | N | 0.216 | neutral | N | 0.452293882 | None | None | I |
T/V | 0.1651 | likely_benign | 0.1656 | benign | -0.452 | Destabilizing | 0.953 | D | 0.537 | neutral | None | None | None | None | I |
T/W | 0.6965 | likely_pathogenic | 0.6494 | pathogenic | -0.914 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | I |
T/Y | 0.3721 | ambiguous | 0.3398 | benign | -0.666 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.