Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31941 | 96046;96047;96048 | chr2:178544408;178544407;178544406 | chr2:179409135;179409134;179409133 |
N2AB | 30300 | 91123;91124;91125 | chr2:178544408;178544407;178544406 | chr2:179409135;179409134;179409133 |
N2A | 29373 | 88342;88343;88344 | chr2:178544408;178544407;178544406 | chr2:179409135;179409134;179409133 |
N2B | 22876 | 68851;68852;68853 | chr2:178544408;178544407;178544406 | chr2:179409135;179409134;179409133 |
Novex-1 | 23001 | 69226;69227;69228 | chr2:178544408;178544407;178544406 | chr2:179409135;179409134;179409133 |
Novex-2 | 23068 | 69427;69428;69429 | chr2:178544408;178544407;178544406 | chr2:179409135;179409134;179409133 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | rs779376834 | -2.402 | 0.966 | N | 0.753 | 0.518 | 0.846433868311 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
I/S | rs779376834 | -2.402 | 0.966 | N | 0.753 | 0.518 | 0.846433868311 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/S | rs779376834 | -2.402 | 0.966 | N | 0.753 | 0.518 | 0.846433868311 | gnomAD-4.0.0 | 9.2961E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.27152E-05 | 0 | 0 |
I/T | rs779376834 | -2.144 | 0.801 | N | 0.693 | 0.484 | 0.777538414374 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
I/T | rs779376834 | -2.144 | 0.801 | N | 0.693 | 0.484 | 0.777538414374 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
I/T | rs779376834 | -2.144 | 0.801 | N | 0.693 | 0.484 | 0.777538414374 | gnomAD-4.0.0 | 2.47896E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39072E-06 | 0 | 0 |
I/V | rs750955565 | -1.409 | 0.007 | N | 0.153 | 0.097 | 0.457286136841 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
I/V | rs750955565 | -1.409 | 0.007 | N | 0.153 | 0.097 | 0.457286136841 | gnomAD-4.0.0 | 3.18281E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71772E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5844 | likely_pathogenic | 0.5461 | ambiguous | -2.147 | Highly Destabilizing | 0.688 | D | 0.585 | neutral | None | None | None | None | I |
I/C | 0.8592 | likely_pathogenic | 0.8416 | pathogenic | -1.389 | Destabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | I |
I/D | 0.9731 | likely_pathogenic | 0.9631 | pathogenic | -1.682 | Destabilizing | 0.991 | D | 0.775 | deleterious | None | None | None | None | I |
I/E | 0.9531 | likely_pathogenic | 0.9377 | pathogenic | -1.6 | Destabilizing | 0.991 | D | 0.785 | deleterious | None | None | None | None | I |
I/F | 0.591 | likely_pathogenic | 0.5636 | ambiguous | -1.402 | Destabilizing | 0.934 | D | 0.671 | neutral | N | 0.519105546 | None | None | I |
I/G | 0.9303 | likely_pathogenic | 0.9169 | pathogenic | -2.568 | Highly Destabilizing | 0.991 | D | 0.797 | deleterious | None | None | None | None | I |
I/H | 0.9463 | likely_pathogenic | 0.933 | pathogenic | -1.767 | Destabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | I |
I/K | 0.9202 | likely_pathogenic | 0.8979 | pathogenic | -1.541 | Destabilizing | 0.974 | D | 0.791 | deleterious | None | None | None | None | I |
I/L | 0.18 | likely_benign | 0.173 | benign | -1.011 | Destabilizing | 0.005 | N | 0.173 | neutral | N | 0.506152584 | None | None | I |
I/M | 0.2282 | likely_benign | 0.2113 | benign | -0.803 | Destabilizing | 0.934 | D | 0.653 | neutral | N | 0.521640441 | None | None | I |
I/N | 0.7843 | likely_pathogenic | 0.7345 | pathogenic | -1.478 | Destabilizing | 0.989 | D | 0.782 | deleterious | N | 0.514260609 | None | None | I |
I/P | 0.8076 | likely_pathogenic | 0.8258 | pathogenic | -1.362 | Destabilizing | 0.991 | D | 0.781 | deleterious | None | None | None | None | I |
I/Q | 0.9353 | likely_pathogenic | 0.9172 | pathogenic | -1.564 | Destabilizing | 0.991 | D | 0.779 | deleterious | None | None | None | None | I |
I/R | 0.8874 | likely_pathogenic | 0.8498 | pathogenic | -0.994 | Destabilizing | 0.974 | D | 0.78 | deleterious | None | None | None | None | I |
I/S | 0.7413 | likely_pathogenic | 0.6854 | pathogenic | -2.189 | Highly Destabilizing | 0.966 | D | 0.753 | deleterious | N | 0.510373042 | None | None | I |
I/T | 0.3595 | ambiguous | 0.2864 | benign | -1.976 | Destabilizing | 0.801 | D | 0.693 | prob.neutral | N | 0.510373041 | None | None | I |
I/V | 0.0755 | likely_benign | 0.0692 | benign | -1.362 | Destabilizing | 0.007 | N | 0.153 | neutral | N | 0.473232089 | None | None | I |
I/W | 0.9801 | likely_pathogenic | 0.9757 | pathogenic | -1.55 | Destabilizing | 0.998 | D | 0.768 | deleterious | None | None | None | None | I |
I/Y | 0.9195 | likely_pathogenic | 0.9035 | pathogenic | -1.326 | Destabilizing | 0.974 | D | 0.695 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.