Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31945 | 96058;96059;96060 | chr2:178544396;178544395;178544394 | chr2:179409123;179409122;179409121 |
N2AB | 30304 | 91135;91136;91137 | chr2:178544396;178544395;178544394 | chr2:179409123;179409122;179409121 |
N2A | 29377 | 88354;88355;88356 | chr2:178544396;178544395;178544394 | chr2:179409123;179409122;179409121 |
N2B | 22880 | 68863;68864;68865 | chr2:178544396;178544395;178544394 | chr2:179409123;179409122;179409121 |
Novex-1 | 23005 | 69238;69239;69240 | chr2:178544396;178544395;178544394 | chr2:179409123;179409122;179409121 |
Novex-2 | 23072 | 69439;69440;69441 | chr2:178544396;178544395;178544394 | chr2:179409123;179409122;179409121 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.37 | N | 0.294 | 0.166 | 0.383256108077 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4501 | ambiguous | 0.4671 | ambiguous | -2.469 | Highly Destabilizing | 0.978 | D | 0.643 | neutral | N | 0.470595089 | None | None | N |
V/C | 0.722 | likely_pathogenic | 0.7255 | pathogenic | -1.879 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
V/D | 0.7966 | likely_pathogenic | 0.8102 | pathogenic | -3.571 | Highly Destabilizing | 0.999 | D | 0.819 | deleterious | N | 0.471493689 | None | None | N |
V/E | 0.594 | likely_pathogenic | 0.6334 | pathogenic | -3.328 | Highly Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
V/F | 0.2345 | likely_benign | 0.2579 | benign | -1.584 | Destabilizing | 0.997 | D | 0.785 | deleterious | N | 0.515825286 | None | None | N |
V/G | 0.6507 | likely_pathogenic | 0.6314 | pathogenic | -2.979 | Highly Destabilizing | 0.999 | D | 0.804 | deleterious | N | 0.489966792 | None | None | N |
V/H | 0.7096 | likely_pathogenic | 0.7352 | pathogenic | -2.838 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
V/I | 0.0686 | likely_benign | 0.0706 | benign | -1.005 | Destabilizing | 0.37 | N | 0.294 | neutral | N | 0.473901305 | None | None | N |
V/K | 0.6477 | likely_pathogenic | 0.6711 | pathogenic | -2.341 | Highly Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
V/L | 0.2026 | likely_benign | 0.2149 | benign | -1.005 | Destabilizing | 0.9 | D | 0.569 | neutral | N | 0.479133767 | None | None | N |
V/M | 0.1871 | likely_benign | 0.2077 | benign | -0.958 | Destabilizing | 0.998 | D | 0.75 | deleterious | None | None | None | None | N |
V/N | 0.6048 | likely_pathogenic | 0.6334 | pathogenic | -2.799 | Highly Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
V/P | 0.9869 | likely_pathogenic | 0.9834 | pathogenic | -1.474 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
V/Q | 0.5581 | ambiguous | 0.5856 | pathogenic | -2.608 | Highly Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
V/R | 0.5753 | likely_pathogenic | 0.5916 | pathogenic | -2.069 | Highly Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
V/S | 0.4973 | ambiguous | 0.5173 | ambiguous | -3.275 | Highly Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
V/T | 0.3516 | ambiguous | 0.3842 | ambiguous | -2.913 | Highly Destabilizing | 0.992 | D | 0.71 | prob.delet. | None | None | None | None | N |
V/W | 0.8676 | likely_pathogenic | 0.8711 | pathogenic | -2.242 | Highly Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
V/Y | 0.6084 | likely_pathogenic | 0.6269 | pathogenic | -1.891 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.