Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31950 | 96073;96074;96075 | chr2:178544381;178544380;178544379 | chr2:179409108;179409107;179409106 |
N2AB | 30309 | 91150;91151;91152 | chr2:178544381;178544380;178544379 | chr2:179409108;179409107;179409106 |
N2A | 29382 | 88369;88370;88371 | chr2:178544381;178544380;178544379 | chr2:179409108;179409107;179409106 |
N2B | 22885 | 68878;68879;68880 | chr2:178544381;178544380;178544379 | chr2:179409108;179409107;179409106 |
Novex-1 | 23010 | 69253;69254;69255 | chr2:178544381;178544380;178544379 | chr2:179409108;179409107;179409106 |
Novex-2 | 23077 | 69454;69455;69456 | chr2:178544381;178544380;178544379 | chr2:179409108;179409107;179409106 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs727505199 | -0.651 | 0.999 | N | 0.559 | 0.401 | 0.344945010812 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs727505199 | -0.651 | 0.999 | N | 0.559 | 0.401 | 0.344945010812 | gnomAD-4.0.0 | 1.36847E-06 | None | None | None | None | N | None | 2.98793E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15934E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1512 | likely_benign | 0.1663 | benign | -0.824 | Destabilizing | 0.999 | D | 0.64 | neutral | N | 0.476712324 | None | None | N |
E/C | 0.781 | likely_pathogenic | 0.7996 | pathogenic | -0.568 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
E/D | 0.2278 | likely_benign | 0.2339 | benign | -1.325 | Destabilizing | 0.999 | D | 0.428 | neutral | N | 0.433710908 | None | None | N |
E/F | 0.7908 | likely_pathogenic | 0.7955 | pathogenic | -0.204 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/G | 0.1645 | likely_benign | 0.1697 | benign | -1.233 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | N | 0.464207174 | None | None | N |
E/H | 0.5266 | ambiguous | 0.5413 | ambiguous | -0.627 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/I | 0.2956 | likely_benign | 0.3053 | benign | 0.306 | Stabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
E/K | 0.1299 | likely_benign | 0.1334 | benign | -1.069 | Destabilizing | 0.999 | D | 0.559 | neutral | N | 0.41597051 | None | None | N |
E/L | 0.3027 | likely_benign | 0.3291 | benign | 0.306 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/M | 0.3577 | ambiguous | 0.3811 | ambiguous | 0.822 | Stabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | N |
E/N | 0.3184 | likely_benign | 0.3364 | benign | -1.491 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/P | 0.3904 | ambiguous | 0.4317 | ambiguous | -0.049 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/Q | 0.1282 | likely_benign | 0.1354 | benign | -1.277 | Destabilizing | 1.0 | D | 0.61 | neutral | N | 0.482502146 | None | None | N |
E/R | 0.2468 | likely_benign | 0.2527 | benign | -0.786 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/S | 0.2681 | likely_benign | 0.2897 | benign | -1.858 | Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
E/T | 0.2596 | likely_benign | 0.2811 | benign | -1.522 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
E/V | 0.1704 | likely_benign | 0.1804 | benign | -0.049 | Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.450200513 | None | None | N |
E/W | 0.9026 | likely_pathogenic | 0.9018 | pathogenic | -0.045 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/Y | 0.684 | likely_pathogenic | 0.6884 | pathogenic | -0.006 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.