Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31954 | 96085;96086;96087 | chr2:178544369;178544368;178544367 | chr2:179409096;179409095;179409094 |
N2AB | 30313 | 91162;91163;91164 | chr2:178544369;178544368;178544367 | chr2:179409096;179409095;179409094 |
N2A | 29386 | 88381;88382;88383 | chr2:178544369;178544368;178544367 | chr2:179409096;179409095;179409094 |
N2B | 22889 | 68890;68891;68892 | chr2:178544369;178544368;178544367 | chr2:179409096;179409095;179409094 |
Novex-1 | 23014 | 69265;69266;69267 | chr2:178544369;178544368;178544367 | chr2:179409096;179409095;179409094 |
Novex-2 | 23081 | 69466;69467;69468 | chr2:178544369;178544368;178544367 | chr2:179409096;179409095;179409094 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs765845110 | 0.05 | 0.001 | N | 0.077 | 0.077 | 0.0716867268079 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.0934 | likely_benign | 0.092 | benign | 0.074 | Stabilizing | 0.201 | N | 0.34 | neutral | N | 0.487214532 | None | None | N |
D/C | 0.3535 | ambiguous | 0.3511 | ambiguous | -0.034 | Destabilizing | 0.992 | D | 0.357 | neutral | None | None | None | None | N |
D/E | 0.0801 | likely_benign | 0.0817 | benign | -0.31 | Destabilizing | 0.001 | N | 0.077 | neutral | N | 0.418525238 | None | None | N |
D/F | 0.391 | ambiguous | 0.3845 | ambiguous | -0.109 | Destabilizing | 0.972 | D | 0.365 | neutral | None | None | None | None | N |
D/G | 0.0855 | likely_benign | 0.0822 | benign | -0.018 | Destabilizing | 0.549 | D | 0.385 | neutral | N | 0.440727307 | None | None | N |
D/H | 0.1749 | likely_benign | 0.1652 | benign | 0.451 | Stabilizing | 0.896 | D | 0.379 | neutral | N | 0.508821955 | None | None | N |
D/I | 0.1971 | likely_benign | 0.1853 | benign | 0.242 | Stabilizing | 0.92 | D | 0.378 | neutral | None | None | None | None | N |
D/K | 0.1476 | likely_benign | 0.1385 | benign | 0.469 | Stabilizing | 0.25 | N | 0.4 | neutral | None | None | None | None | N |
D/L | 0.1881 | likely_benign | 0.1831 | benign | 0.242 | Stabilizing | 0.617 | D | 0.357 | neutral | None | None | None | None | N |
D/M | 0.3282 | likely_benign | 0.3231 | benign | 0.087 | Stabilizing | 0.992 | D | 0.359 | neutral | None | None | None | None | N |
D/N | 0.0754 | likely_benign | 0.0738 | benign | 0.344 | Stabilizing | 0.549 | D | 0.293 | neutral | N | 0.465991111 | None | None | N |
D/P | 0.2818 | likely_benign | 0.2738 | benign | 0.204 | Stabilizing | 0.766 | D | 0.385 | neutral | None | None | None | None | N |
D/Q | 0.1572 | likely_benign | 0.1513 | benign | 0.319 | Stabilizing | 0.059 | N | 0.201 | neutral | None | None | None | None | N |
D/R | 0.1993 | likely_benign | 0.1836 | benign | 0.634 | Stabilizing | 0.617 | D | 0.376 | neutral | None | None | None | None | N |
D/S | 0.0768 | likely_benign | 0.075 | benign | 0.231 | Stabilizing | 0.25 | N | 0.315 | neutral | None | None | None | None | N |
D/T | 0.1194 | likely_benign | 0.1169 | benign | 0.304 | Stabilizing | 0.617 | D | 0.359 | neutral | None | None | None | None | N |
D/V | 0.1245 | likely_benign | 0.1184 | benign | 0.204 | Stabilizing | 0.549 | D | 0.358 | neutral | N | 0.494217862 | None | None | N |
D/W | 0.7212 | likely_pathogenic | 0.7073 | pathogenic | -0.103 | Destabilizing | 0.992 | D | 0.392 | neutral | None | None | None | None | N |
D/Y | 0.177 | likely_benign | 0.1705 | benign | 0.11 | Stabilizing | 0.963 | D | 0.365 | neutral | N | 0.508475239 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.