Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31957 | 96094;96095;96096 | chr2:178544360;178544359;178544358 | chr2:179409087;179409086;179409085 |
N2AB | 30316 | 91171;91172;91173 | chr2:178544360;178544359;178544358 | chr2:179409087;179409086;179409085 |
N2A | 29389 | 88390;88391;88392 | chr2:178544360;178544359;178544358 | chr2:179409087;179409086;179409085 |
N2B | 22892 | 68899;68900;68901 | chr2:178544360;178544359;178544358 | chr2:179409087;179409086;179409085 |
Novex-1 | 23017 | 69274;69275;69276 | chr2:178544360;178544359;178544358 | chr2:179409087;179409086;179409085 |
Novex-2 | 23084 | 69475;69476;69477 | chr2:178544360;178544359;178544358 | chr2:179409087;179409086;179409085 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs1302879352 | -0.001 | 0.741 | N | 0.548 | 0.303 | 0.350964488264 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/H | rs1302879352 | -0.001 | 0.741 | N | 0.548 | 0.303 | 0.350964488264 | gnomAD-4.0.0 | 1.59135E-06 | None | None | None | None | N | None | 0 | 2.28655E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.2834 | likely_benign | 0.31 | benign | -1.475 | Destabilizing | 0.081 | N | 0.514 | neutral | None | None | None | None | N |
Y/C | 0.0826 | likely_benign | 0.0855 | benign | -0.106 | Destabilizing | 0.001 | N | 0.446 | neutral | N | 0.482355791 | None | None | N |
Y/D | 0.1971 | likely_benign | 0.2117 | benign | -0.159 | Destabilizing | 0.741 | D | 0.569 | neutral | N | 0.41389857 | None | None | N |
Y/E | 0.298 | likely_benign | 0.3136 | benign | -0.134 | Destabilizing | 0.555 | D | 0.549 | neutral | None | None | None | None | N |
Y/F | 0.08 | likely_benign | 0.0835 | benign | -0.679 | Destabilizing | None | N | 0.273 | neutral | N | 0.401662779 | None | None | N |
Y/G | 0.2369 | likely_benign | 0.2666 | benign | -1.729 | Destabilizing | 0.38 | N | 0.501 | neutral | None | None | None | None | N |
Y/H | 0.0935 | likely_benign | 0.0922 | benign | -0.444 | Destabilizing | 0.741 | D | 0.548 | neutral | N | 0.425982433 | None | None | N |
Y/I | 0.1847 | likely_benign | 0.1944 | benign | -0.751 | Destabilizing | 0.081 | N | 0.497 | neutral | None | None | None | None | N |
Y/K | 0.1939 | likely_benign | 0.1932 | benign | -0.444 | Destabilizing | 0.555 | D | 0.545 | neutral | None | None | None | None | N |
Y/L | 0.2161 | likely_benign | 0.2274 | benign | -0.751 | Destabilizing | 0.001 | N | 0.298 | neutral | None | None | None | None | N |
Y/M | 0.3042 | likely_benign | 0.3252 | benign | -0.444 | Destabilizing | 0.38 | N | 0.522 | neutral | None | None | None | None | N |
Y/N | 0.1067 | likely_benign | 0.1152 | benign | -0.625 | Destabilizing | 0.484 | N | 0.561 | neutral | N | 0.425865003 | None | None | N |
Y/P | 0.8462 | likely_pathogenic | 0.8566 | pathogenic | -0.981 | Destabilizing | 0.791 | D | 0.569 | neutral | None | None | None | None | N |
Y/Q | 0.1823 | likely_benign | 0.183 | benign | -0.6 | Destabilizing | 0.791 | D | 0.529 | neutral | None | None | None | None | N |
Y/R | 0.1618 | likely_benign | 0.1569 | benign | -0.085 | Destabilizing | 0.555 | D | 0.561 | neutral | None | None | None | None | N |
Y/S | 0.1268 | likely_benign | 0.1361 | benign | -1.007 | Destabilizing | 0.317 | N | 0.485 | neutral | N | 0.376014973 | None | None | N |
Y/T | 0.194 | likely_benign | 0.2086 | benign | -0.894 | Destabilizing | 0.38 | N | 0.485 | neutral | None | None | None | None | N |
Y/V | 0.154 | likely_benign | 0.1638 | benign | -0.981 | Destabilizing | 0.081 | N | 0.516 | neutral | None | None | None | None | N |
Y/W | 0.299 | likely_benign | 0.3276 | benign | -0.557 | Destabilizing | 0.935 | D | 0.537 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.