Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31960 | 96103;96104;96105 | chr2:178544351;178544350;178544349 | chr2:179409078;179409077;179409076 |
N2AB | 30319 | 91180;91181;91182 | chr2:178544351;178544350;178544349 | chr2:179409078;179409077;179409076 |
N2A | 29392 | 88399;88400;88401 | chr2:178544351;178544350;178544349 | chr2:179409078;179409077;179409076 |
N2B | 22895 | 68908;68909;68910 | chr2:178544351;178544350;178544349 | chr2:179409078;179409077;179409076 |
Novex-1 | 23020 | 69283;69284;69285 | chr2:178544351;178544350;178544349 | chr2:179409078;179409077;179409076 |
Novex-2 | 23087 | 69484;69485;69486 | chr2:178544351;178544350;178544349 | chr2:179409078;179409077;179409076 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs776521449 | -1.057 | 0.997 | N | 0.663 | 0.361 | 0.331365685468 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
H/R | rs776521449 | -1.057 | 0.997 | N | 0.663 | 0.361 | 0.331365685468 | gnomAD-4.0.0 | 4.77406E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71716E-06 | 0 | 3.02425E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7358 | likely_pathogenic | 0.6933 | pathogenic | -1.475 | Destabilizing | 0.997 | D | 0.658 | neutral | None | None | None | None | N |
H/C | 0.3802 | ambiguous | 0.3579 | ambiguous | -0.873 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
H/D | 0.6175 | likely_pathogenic | 0.5338 | ambiguous | -1.031 | Destabilizing | 0.997 | D | 0.667 | neutral | N | 0.425029923 | None | None | N |
H/E | 0.8208 | likely_pathogenic | 0.7836 | pathogenic | -0.862 | Destabilizing | 0.997 | D | 0.607 | neutral | None | None | None | None | N |
H/F | 0.6645 | likely_pathogenic | 0.6446 | pathogenic | 0.099 | Stabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
H/G | 0.6736 | likely_pathogenic | 0.649 | pathogenic | -1.9 | Destabilizing | 0.997 | D | 0.677 | prob.neutral | None | None | None | None | N |
H/I | 0.7318 | likely_pathogenic | 0.6983 | pathogenic | -0.251 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
H/K | 0.8745 | likely_pathogenic | 0.8362 | pathogenic | -1.007 | Destabilizing | 0.997 | D | 0.667 | neutral | None | None | None | None | N |
H/L | 0.4466 | ambiguous | 0.3959 | ambiguous | -0.251 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | N | 0.435785634 | None | None | N |
H/M | 0.7699 | likely_pathogenic | 0.7578 | pathogenic | -0.544 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
H/N | 0.1654 | likely_benign | 0.164 | benign | -1.48 | Destabilizing | 0.997 | D | 0.597 | neutral | N | 0.334026704 | None | None | N |
H/P | 0.5076 | ambiguous | 0.4208 | ambiguous | -0.644 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | N | 0.445559911 | None | None | N |
H/Q | 0.6607 | likely_pathogenic | 0.6184 | pathogenic | -1.132 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | N | 0.45695034 | None | None | N |
H/R | 0.7428 | likely_pathogenic | 0.6684 | pathogenic | -1.281 | Destabilizing | 0.997 | D | 0.663 | neutral | N | 0.448504216 | None | None | N |
H/S | 0.443 | ambiguous | 0.4353 | ambiguous | -1.685 | Destabilizing | 0.997 | D | 0.676 | prob.neutral | None | None | None | None | N |
H/T | 0.5745 | likely_pathogenic | 0.5515 | ambiguous | -1.387 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
H/V | 0.6845 | likely_pathogenic | 0.6419 | pathogenic | -0.644 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
H/W | 0.7878 | likely_pathogenic | 0.759 | pathogenic | 0.659 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
H/Y | 0.3621 | ambiguous | 0.3071 | benign | 0.594 | Stabilizing | 0.997 | D | 0.603 | neutral | N | 0.393267008 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.