Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31961 | 96106;96107;96108 | chr2:178544348;178544347;178544346 | chr2:179409075;179409074;179409073 |
N2AB | 30320 | 91183;91184;91185 | chr2:178544348;178544347;178544346 | chr2:179409075;179409074;179409073 |
N2A | 29393 | 88402;88403;88404 | chr2:178544348;178544347;178544346 | chr2:179409075;179409074;179409073 |
N2B | 22896 | 68911;68912;68913 | chr2:178544348;178544347;178544346 | chr2:179409075;179409074;179409073 |
Novex-1 | 23021 | 69286;69287;69288 | chr2:178544348;178544347;178544346 | chr2:179409075;179409074;179409073 |
Novex-2 | 23088 | 69487;69488;69489 | chr2:178544348;178544347;178544346 | chr2:179409075;179409074;179409073 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1696035879 | None | 0.008 | N | 0.14 | 0.06 | 0.117506650769 | gnomAD-4.0.0 | 1.59136E-06 | None | None | None | None | I | None | 5.65611E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1336039632 | 0.068 | 0.901 | N | 0.474 | 0.314 | 0.393927044628 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65673E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0665 | likely_benign | 0.0678 | benign | -0.187 | Destabilizing | 0.008 | N | 0.14 | neutral | N | 0.451293804 | None | None | I |
T/C | 0.2901 | likely_benign | 0.3246 | benign | -0.263 | Destabilizing | 0.989 | D | 0.504 | neutral | None | None | None | None | I |
T/D | 0.2758 | likely_benign | 0.2682 | benign | 0.044 | Stabilizing | 0.923 | D | 0.397 | neutral | None | None | None | None | I |
T/E | 0.2046 | likely_benign | 0.199 | benign | -0.044 | Destabilizing | 0.775 | D | 0.398 | neutral | None | None | None | None | I |
T/F | 0.2561 | likely_benign | 0.2681 | benign | -0.801 | Destabilizing | 0.961 | D | 0.577 | neutral | None | None | None | None | I |
T/G | 0.1434 | likely_benign | 0.1506 | benign | -0.271 | Destabilizing | 0.633 | D | 0.445 | neutral | None | None | None | None | I |
T/H | 0.1871 | likely_benign | 0.1934 | benign | -0.452 | Destabilizing | 0.996 | D | 0.587 | neutral | None | None | None | None | I |
T/I | 0.1561 | likely_benign | 0.1624 | benign | -0.09 | Destabilizing | 0.901 | D | 0.474 | neutral | N | 0.47039964 | None | None | I |
T/K | 0.1198 | likely_benign | 0.1188 | benign | -0.277 | Destabilizing | 0.775 | D | 0.409 | neutral | None | None | None | None | I |
T/L | 0.0939 | likely_benign | 0.0945 | benign | -0.09 | Destabilizing | 0.633 | D | 0.42 | neutral | None | None | None | None | I |
T/M | 0.1027 | likely_benign | 0.1031 | benign | -0.093 | Destabilizing | 0.996 | D | 0.487 | neutral | None | None | None | None | I |
T/N | 0.0989 | likely_benign | 0.0991 | benign | -0.033 | Destabilizing | 0.901 | D | 0.378 | neutral | N | 0.466492543 | None | None | I |
T/P | 0.0762 | likely_benign | 0.0746 | benign | -0.096 | Destabilizing | 0.949 | D | 0.469 | neutral | N | 0.466783332 | None | None | I |
T/Q | 0.1491 | likely_benign | 0.1539 | benign | -0.252 | Destabilizing | 0.961 | D | 0.467 | neutral | None | None | None | None | I |
T/R | 0.1163 | likely_benign | 0.1171 | benign | 0.03 | Stabilizing | 0.923 | D | 0.469 | neutral | None | None | None | None | I |
T/S | 0.081 | likely_benign | 0.0831 | benign | -0.199 | Destabilizing | 0.092 | N | 0.133 | neutral | N | 0.451813879 | None | None | I |
T/V | 0.1172 | likely_benign | 0.1211 | benign | -0.096 | Destabilizing | 0.633 | D | 0.402 | neutral | None | None | None | None | I |
T/W | 0.5138 | ambiguous | 0.5318 | ambiguous | -0.877 | Destabilizing | 0.996 | D | 0.639 | neutral | None | None | None | None | I |
T/Y | 0.2407 | likely_benign | 0.2557 | benign | -0.56 | Destabilizing | 0.987 | D | 0.571 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.