Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3196296109;96110;96111 chr2:178544345;178544344;178544343chr2:179409072;179409071;179409070
N2AB3032191186;91187;91188 chr2:178544345;178544344;178544343chr2:179409072;179409071;179409070
N2A2939488405;88406;88407 chr2:178544345;178544344;178544343chr2:179409072;179409071;179409070
N2B2289768914;68915;68916 chr2:178544345;178544344;178544343chr2:179409072;179409071;179409070
Novex-12302269289;69290;69291 chr2:178544345;178544344;178544343chr2:179409072;179409071;179409070
Novex-22308969490;69491;69492 chr2:178544345;178544344;178544343chr2:179409072;179409071;179409070
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: N
  • RefSeq wild type transcript codon: AAT
  • RefSeq wild type template codon: TTA
  • Domain: Fn3-121
  • Domain position: 54
  • Structural Position: 72
  • Q(SASA): 0.5981
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
N/D rs369087584 0.363 0.014 N 0.239 0.148 None gnomAD-2.1.1 4.28E-05 None None None None I None 4.54621E-04 2.83E-05 None 0 0 None 0 None 0 0 0
N/D rs369087584 0.363 0.014 N 0.239 0.148 None gnomAD-3.1.2 1.90549E-04 None None None None I None 6.7548E-04 0 0 0 0 None 0 0 0 0 4.77555E-04
N/D rs369087584 0.363 0.014 N 0.239 0.148 None gnomAD-4.0.0 3.65621E-05 None None None None I None 7.47484E-04 1.66711E-05 None 0 0 None 0 0 0 0 3.20215E-05
N/I rs535943753 0.165 0.033 N 0.461 0.103 0.426787303895 gnomAD-2.1.1 3.21E-05 None None None None I None 3.71901E-04 0 None 0 0 None 0 None 0 0 0
N/I rs535943753 0.165 0.033 N 0.461 0.103 0.426787303895 gnomAD-3.1.2 7.88E-05 None None None None I None 2.89464E-04 0 0 0 0 None 0 0 0 0 0
N/I rs535943753 0.165 0.033 N 0.461 0.103 0.426787303895 1000 genomes 1.99681E-04 None None None None I None 8E-04 0 None None 0 0 None None None 0 None
N/I rs535943753 0.165 0.033 N 0.461 0.103 0.426787303895 gnomAD-4.0.0 1.67307E-05 None None None None I None 3.46463E-04 0 None 0 0 None 0 0 0 0 1.60051E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
N/A 0.0941 likely_benign 0.1112 benign -0.33 Destabilizing None N 0.189 neutral None None None None I
N/C 0.1847 likely_benign 0.2245 benign 0.414 Stabilizing 0.497 N 0.329 neutral None None None None I
N/D 0.1126 likely_benign 0.1123 benign 0.048 Stabilizing 0.014 N 0.239 neutral N 0.414642358 None None I
N/E 0.201 likely_benign 0.2075 benign 0.02 Stabilizing 0.009 N 0.209 neutral None None None None I
N/F 0.3776 ambiguous 0.4269 ambiguous -0.691 Destabilizing 0.245 N 0.413 neutral None None None None I
N/G 0.1238 likely_benign 0.1448 benign -0.513 Destabilizing None N 0.161 neutral None None None None I
N/H 0.0889 likely_benign 0.0954 benign -0.592 Destabilizing 0.196 N 0.231 neutral N 0.424472563 None None I
N/I 0.1772 likely_benign 0.193 benign 0.067 Stabilizing 0.033 N 0.461 neutral N 0.454931543 None None I
N/K 0.1259 likely_benign 0.1251 benign 0.043 Stabilizing None N 0.171 neutral N 0.411063335 None None I
N/L 0.1463 likely_benign 0.1601 benign 0.067 Stabilizing 0.009 N 0.35 neutral None None None None I
N/M 0.1958 likely_benign 0.2144 benign 0.371 Stabilizing 0.497 N 0.328 neutral None None None None I
N/P 0.2792 likely_benign 0.259 benign -0.039 Destabilizing 0.085 N 0.469 neutral None None None None I
N/Q 0.1585 likely_benign 0.1724 benign -0.299 Destabilizing 0.002 N 0.187 neutral None None None None I
N/R 0.1573 likely_benign 0.1662 benign 0.063 Stabilizing 0.009 N 0.247 neutral None None None None I
N/S 0.0602 likely_benign 0.0657 benign -0.087 Destabilizing 0.001 N 0.142 neutral N 0.379854994 None None I
N/T 0.0733 likely_benign 0.0815 benign 0.025 Stabilizing None N 0.134 neutral N 0.414871644 None None I
N/V 0.1401 likely_benign 0.1553 benign -0.039 Destabilizing 0.009 N 0.359 neutral None None None None I
N/W 0.5888 likely_pathogenic 0.6358 pathogenic -0.705 Destabilizing 0.788 D 0.328 neutral None None None None I
N/Y 0.147 likely_benign 0.1614 benign -0.437 Destabilizing 0.196 N 0.397 neutral N 0.470476998 None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.