Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31962 | 96109;96110;96111 | chr2:178544345;178544344;178544343 | chr2:179409072;179409071;179409070 |
N2AB | 30321 | 91186;91187;91188 | chr2:178544345;178544344;178544343 | chr2:179409072;179409071;179409070 |
N2A | 29394 | 88405;88406;88407 | chr2:178544345;178544344;178544343 | chr2:179409072;179409071;179409070 |
N2B | 22897 | 68914;68915;68916 | chr2:178544345;178544344;178544343 | chr2:179409072;179409071;179409070 |
Novex-1 | 23022 | 69289;69290;69291 | chr2:178544345;178544344;178544343 | chr2:179409072;179409071;179409070 |
Novex-2 | 23089 | 69490;69491;69492 | chr2:178544345;178544344;178544343 | chr2:179409072;179409071;179409070 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs369087584 | 0.363 | 0.014 | N | 0.239 | 0.148 | None | gnomAD-2.1.1 | 4.28E-05 | None | None | None | None | I | None | 4.54621E-04 | 2.83E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/D | rs369087584 | 0.363 | 0.014 | N | 0.239 | 0.148 | None | gnomAD-3.1.2 | 1.90549E-04 | None | None | None | None | I | None | 6.7548E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.77555E-04 |
N/D | rs369087584 | 0.363 | 0.014 | N | 0.239 | 0.148 | None | gnomAD-4.0.0 | 3.65621E-05 | None | None | None | None | I | None | 7.47484E-04 | 1.66711E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.20215E-05 |
N/I | rs535943753 | 0.165 | 0.033 | N | 0.461 | 0.103 | 0.426787303895 | gnomAD-2.1.1 | 3.21E-05 | None | None | None | None | I | None | 3.71901E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/I | rs535943753 | 0.165 | 0.033 | N | 0.461 | 0.103 | 0.426787303895 | gnomAD-3.1.2 | 7.88E-05 | None | None | None | None | I | None | 2.89464E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/I | rs535943753 | 0.165 | 0.033 | N | 0.461 | 0.103 | 0.426787303895 | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
N/I | rs535943753 | 0.165 | 0.033 | N | 0.461 | 0.103 | 0.426787303895 | gnomAD-4.0.0 | 1.67307E-05 | None | None | None | None | I | None | 3.46463E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60051E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.0941 | likely_benign | 0.1112 | benign | -0.33 | Destabilizing | None | N | 0.189 | neutral | None | None | None | None | I |
N/C | 0.1847 | likely_benign | 0.2245 | benign | 0.414 | Stabilizing | 0.497 | N | 0.329 | neutral | None | None | None | None | I |
N/D | 0.1126 | likely_benign | 0.1123 | benign | 0.048 | Stabilizing | 0.014 | N | 0.239 | neutral | N | 0.414642358 | None | None | I |
N/E | 0.201 | likely_benign | 0.2075 | benign | 0.02 | Stabilizing | 0.009 | N | 0.209 | neutral | None | None | None | None | I |
N/F | 0.3776 | ambiguous | 0.4269 | ambiguous | -0.691 | Destabilizing | 0.245 | N | 0.413 | neutral | None | None | None | None | I |
N/G | 0.1238 | likely_benign | 0.1448 | benign | -0.513 | Destabilizing | None | N | 0.161 | neutral | None | None | None | None | I |
N/H | 0.0889 | likely_benign | 0.0954 | benign | -0.592 | Destabilizing | 0.196 | N | 0.231 | neutral | N | 0.424472563 | None | None | I |
N/I | 0.1772 | likely_benign | 0.193 | benign | 0.067 | Stabilizing | 0.033 | N | 0.461 | neutral | N | 0.454931543 | None | None | I |
N/K | 0.1259 | likely_benign | 0.1251 | benign | 0.043 | Stabilizing | None | N | 0.171 | neutral | N | 0.411063335 | None | None | I |
N/L | 0.1463 | likely_benign | 0.1601 | benign | 0.067 | Stabilizing | 0.009 | N | 0.35 | neutral | None | None | None | None | I |
N/M | 0.1958 | likely_benign | 0.2144 | benign | 0.371 | Stabilizing | 0.497 | N | 0.328 | neutral | None | None | None | None | I |
N/P | 0.2792 | likely_benign | 0.259 | benign | -0.039 | Destabilizing | 0.085 | N | 0.469 | neutral | None | None | None | None | I |
N/Q | 0.1585 | likely_benign | 0.1724 | benign | -0.299 | Destabilizing | 0.002 | N | 0.187 | neutral | None | None | None | None | I |
N/R | 0.1573 | likely_benign | 0.1662 | benign | 0.063 | Stabilizing | 0.009 | N | 0.247 | neutral | None | None | None | None | I |
N/S | 0.0602 | likely_benign | 0.0657 | benign | -0.087 | Destabilizing | 0.001 | N | 0.142 | neutral | N | 0.379854994 | None | None | I |
N/T | 0.0733 | likely_benign | 0.0815 | benign | 0.025 | Stabilizing | None | N | 0.134 | neutral | N | 0.414871644 | None | None | I |
N/V | 0.1401 | likely_benign | 0.1553 | benign | -0.039 | Destabilizing | 0.009 | N | 0.359 | neutral | None | None | None | None | I |
N/W | 0.5888 | likely_pathogenic | 0.6358 | pathogenic | -0.705 | Destabilizing | 0.788 | D | 0.328 | neutral | None | None | None | None | I |
N/Y | 0.147 | likely_benign | 0.1614 | benign | -0.437 | Destabilizing | 0.196 | N | 0.397 | neutral | N | 0.470476998 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.