Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31968 | 96127;96128;96129 | chr2:178544327;178544326;178544325 | chr2:179409054;179409053;179409052 |
N2AB | 30327 | 91204;91205;91206 | chr2:178544327;178544326;178544325 | chr2:179409054;179409053;179409052 |
N2A | 29400 | 88423;88424;88425 | chr2:178544327;178544326;178544325 | chr2:179409054;179409053;179409052 |
N2B | 22903 | 68932;68933;68934 | chr2:178544327;178544326;178544325 | chr2:179409054;179409053;179409052 |
Novex-1 | 23028 | 69307;69308;69309 | chr2:178544327;178544326;178544325 | chr2:179409054;179409053;179409052 |
Novex-2 | 23095 | 69508;69509;69510 | chr2:178544327;178544326;178544325 | chr2:179409054;179409053;179409052 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.029 | N | 0.462 | 0.199 | 0.165133752707 | gnomAD-4.0.0 | 1.59144E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85873E-06 | 0 | 0 |
T/N | rs1696025684 | None | None | N | 0.135 | 0.139 | 0.124217242631 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/N | rs1696025684 | None | None | N | 0.135 | 0.139 | 0.124217242631 | gnomAD-4.0.0 | 2.56251E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39338E-06 | 0 | 2.84495E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0773 | likely_benign | 0.0762 | benign | -0.957 | Destabilizing | None | N | 0.131 | neutral | N | 0.496794101 | None | None | N |
T/C | 0.17 | likely_benign | 0.1852 | benign | -0.572 | Destabilizing | 0.356 | N | 0.501 | neutral | None | None | None | None | N |
T/D | 0.3467 | ambiguous | 0.3433 | ambiguous | -0.442 | Destabilizing | 0.016 | N | 0.397 | neutral | None | None | None | None | N |
T/E | 0.333 | likely_benign | 0.3343 | benign | -0.318 | Destabilizing | 0.016 | N | 0.398 | neutral | None | None | None | None | N |
T/F | 0.3034 | likely_benign | 0.3133 | benign | -0.79 | Destabilizing | 0.214 | N | 0.615 | neutral | None | None | None | None | N |
T/G | 0.1749 | likely_benign | 0.1778 | benign | -1.321 | Destabilizing | 0.007 | N | 0.366 | neutral | None | None | None | None | N |
T/H | 0.2053 | likely_benign | 0.2134 | benign | -1.384 | Destabilizing | 0.214 | N | 0.557 | neutral | None | None | None | None | N |
T/I | 0.2075 | likely_benign | 0.2188 | benign | -0.034 | Destabilizing | 0.029 | N | 0.462 | neutral | N | 0.501531043 | None | None | N |
T/K | 0.1783 | likely_benign | 0.1887 | benign | -0.471 | Destabilizing | 0.016 | N | 0.399 | neutral | None | None | None | None | N |
T/L | 0.082 | likely_benign | 0.0828 | benign | -0.034 | Destabilizing | None | N | 0.248 | neutral | None | None | None | None | N |
T/M | 0.0881 | likely_benign | 0.0932 | benign | -0.029 | Destabilizing | 0.214 | N | 0.503 | neutral | None | None | None | None | N |
T/N | 0.0726 | likely_benign | 0.0727 | benign | -0.842 | Destabilizing | None | N | 0.135 | neutral | N | 0.519289665 | None | None | N |
T/P | 0.0957 | likely_benign | 0.0983 | benign | -0.309 | Destabilizing | None | N | 0.251 | neutral | N | 0.508843385 | None | None | N |
T/Q | 0.1969 | likely_benign | 0.2095 | benign | -0.739 | Destabilizing | 0.072 | N | 0.523 | neutral | None | None | None | None | N |
T/R | 0.1429 | likely_benign | 0.1543 | benign | -0.481 | Destabilizing | 0.072 | N | 0.494 | neutral | None | None | None | None | N |
T/S | 0.0996 | likely_benign | 0.1013 | benign | -1.169 | Destabilizing | None | N | 0.172 | neutral | N | 0.477395946 | None | None | N |
T/V | 0.147 | likely_benign | 0.1547 | benign | -0.309 | Destabilizing | 0.016 | N | 0.284 | neutral | None | None | None | None | N |
T/W | 0.5883 | likely_pathogenic | 0.6 | pathogenic | -0.829 | Destabilizing | 0.864 | D | 0.603 | neutral | None | None | None | None | N |
T/Y | 0.2467 | likely_benign | 0.2513 | benign | -0.503 | Destabilizing | 0.356 | N | 0.603 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.