Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31972 | 96139;96140;96141 | chr2:178544315;178544314;178544313 | chr2:179409042;179409041;179409040 |
N2AB | 30331 | 91216;91217;91218 | chr2:178544315;178544314;178544313 | chr2:179409042;179409041;179409040 |
N2A | 29404 | 88435;88436;88437 | chr2:178544315;178544314;178544313 | chr2:179409042;179409041;179409040 |
N2B | 22907 | 68944;68945;68946 | chr2:178544315;178544314;178544313 | chr2:179409042;179409041;179409040 |
Novex-1 | 23032 | 69319;69320;69321 | chr2:178544315;178544314;178544313 | chr2:179409042;179409041;179409040 |
Novex-2 | 23099 | 69520;69521;69522 | chr2:178544315;178544314;178544313 | chr2:179409042;179409041;179409040 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs745900975 | 0.041 | 0.999 | N | 0.703 | 0.419 | 0.552408913969 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
V/M | rs745900975 | 0.041 | 0.999 | N | 0.703 | 0.419 | 0.552408913969 | gnomAD-4.0.0 | 6.36568E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.10939E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4544 | ambiguous | 0.5066 | ambiguous | -1.634 | Destabilizing | 0.333 | N | 0.346 | neutral | N | 0.483265884 | None | None | N |
V/C | 0.8554 | likely_pathogenic | 0.8703 | pathogenic | -1.333 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
V/D | 0.9832 | likely_pathogenic | 0.9809 | pathogenic | -2.219 | Highly Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | N |
V/E | 0.9518 | likely_pathogenic | 0.9461 | pathogenic | -1.951 | Destabilizing | 0.998 | D | 0.821 | deleterious | D | 0.530274495 | None | None | N |
V/F | 0.5805 | likely_pathogenic | 0.5828 | pathogenic | -0.944 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
V/G | 0.8391 | likely_pathogenic | 0.8424 | pathogenic | -2.209 | Highly Destabilizing | 0.989 | D | 0.808 | deleterious | D | 0.541630801 | None | None | N |
V/H | 0.9707 | likely_pathogenic | 0.9683 | pathogenic | -2.128 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
V/I | 0.0899 | likely_benign | 0.091 | benign | -0.02 | Destabilizing | 0.99 | D | 0.561 | neutral | None | None | None | None | N |
V/K | 0.9461 | likely_pathogenic | 0.9367 | pathogenic | -1.354 | Destabilizing | 0.999 | D | 0.832 | deleterious | None | None | None | None | N |
V/L | 0.3494 | ambiguous | 0.3819 | ambiguous | -0.02 | Destabilizing | 0.973 | D | 0.681 | prob.neutral | D | 0.522961902 | None | None | N |
V/M | 0.3509 | ambiguous | 0.3756 | ambiguous | -0.23 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | N | 0.504915312 | None | None | N |
V/N | 0.9428 | likely_pathogenic | 0.9427 | pathogenic | -1.816 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
V/P | 0.9759 | likely_pathogenic | 0.9737 | pathogenic | -0.531 | Destabilizing | 0.999 | D | 0.842 | deleterious | None | None | None | None | N |
V/Q | 0.932 | likely_pathogenic | 0.9263 | pathogenic | -1.529 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
V/R | 0.927 | likely_pathogenic | 0.9146 | pathogenic | -1.485 | Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
V/S | 0.7836 | likely_pathogenic | 0.8004 | pathogenic | -2.43 | Highly Destabilizing | 0.983 | D | 0.787 | deleterious | None | None | None | None | N |
V/T | 0.6958 | likely_pathogenic | 0.7229 | pathogenic | -1.987 | Destabilizing | 0.992 | D | 0.685 | prob.neutral | None | None | None | None | N |
V/W | 0.9862 | likely_pathogenic | 0.9846 | pathogenic | -1.465 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
V/Y | 0.9276 | likely_pathogenic | 0.9264 | pathogenic | -1.001 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.