Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31975 | 96148;96149;96150 | chr2:178544306;178544305;178544304 | chr2:179409033;179409032;179409031 |
N2AB | 30334 | 91225;91226;91227 | chr2:178544306;178544305;178544304 | chr2:179409033;179409032;179409031 |
N2A | 29407 | 88444;88445;88446 | chr2:178544306;178544305;178544304 | chr2:179409033;179409032;179409031 |
N2B | 22910 | 68953;68954;68955 | chr2:178544306;178544305;178544304 | chr2:179409033;179409032;179409031 |
Novex-1 | 23035 | 69328;69329;69330 | chr2:178544306;178544305;178544304 | chr2:179409033;179409032;179409031 |
Novex-2 | 23102 | 69529;69530;69531 | chr2:178544306;178544305;178544304 | chr2:179409033;179409032;179409031 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs757718784 | -2.066 | 0.999 | D | 0.831 | 0.521 | 0.845547681124 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
L/F | rs757718784 | -2.066 | 0.999 | D | 0.831 | 0.521 | 0.845547681124 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9199 | likely_pathogenic | 0.9167 | pathogenic | -2.617 | Highly Destabilizing | 0.998 | D | 0.822 | deleterious | None | None | None | None | N |
L/C | 0.8077 | likely_pathogenic | 0.8312 | pathogenic | -1.859 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
L/D | 0.9991 | likely_pathogenic | 0.9985 | pathogenic | -3.161 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
L/E | 0.9929 | likely_pathogenic | 0.9901 | pathogenic | -2.969 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/F | 0.8419 | likely_pathogenic | 0.8084 | pathogenic | -1.68 | Destabilizing | 0.999 | D | 0.831 | deleterious | D | 0.644777917 | None | None | N |
L/G | 0.9806 | likely_pathogenic | 0.9775 | pathogenic | -3.133 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/H | 0.988 | likely_pathogenic | 0.9815 | pathogenic | -2.647 | Highly Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.661604495 | None | None | N |
L/I | 0.3156 | likely_benign | 0.2913 | benign | -1.136 | Destabilizing | 0.884 | D | 0.615 | neutral | D | 0.614748314 | None | None | N |
L/K | 0.9838 | likely_pathogenic | 0.9739 | pathogenic | -2.166 | Highly Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
L/M | 0.3989 | ambiguous | 0.3911 | ambiguous | -0.955 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
L/N | 0.9909 | likely_pathogenic | 0.9889 | pathogenic | -2.44 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
L/P | 0.9919 | likely_pathogenic | 0.9876 | pathogenic | -1.61 | Destabilizing | 1.0 | D | 0.856 | deleterious | D | 0.661604495 | None | None | N |
L/Q | 0.9703 | likely_pathogenic | 0.9587 | pathogenic | -2.367 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/R | 0.9688 | likely_pathogenic | 0.9498 | pathogenic | -1.748 | Destabilizing | 1.0 | D | 0.839 | deleterious | D | 0.661604495 | None | None | N |
L/S | 0.9867 | likely_pathogenic | 0.9843 | pathogenic | -3.064 | Highly Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
L/T | 0.9255 | likely_pathogenic | 0.9145 | pathogenic | -2.737 | Highly Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
L/V | 0.326 | likely_benign | 0.3097 | benign | -1.61 | Destabilizing | 0.981 | D | 0.823 | deleterious | D | 0.586999279 | None | None | N |
L/W | 0.9804 | likely_pathogenic | 0.9697 | pathogenic | -2.129 | Highly Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
L/Y | 0.9842 | likely_pathogenic | 0.9778 | pathogenic | -1.839 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.