Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3198 | 9817;9818;9819 | chr2:178766492;178766491;178766490 | chr2:179631219;179631218;179631217 |
N2AB | 3198 | 9817;9818;9819 | chr2:178766492;178766491;178766490 | chr2:179631219;179631218;179631217 |
N2A | 3198 | 9817;9818;9819 | chr2:178766492;178766491;178766490 | chr2:179631219;179631218;179631217 |
N2B | 3152 | 9679;9680;9681 | chr2:178766492;178766491;178766490 | chr2:179631219;179631218;179631217 |
Novex-1 | 3152 | 9679;9680;9681 | chr2:178766492;178766491;178766490 | chr2:179631219;179631218;179631217 |
Novex-2 | 3152 | 9679;9680;9681 | chr2:178766492;178766491;178766490 | chr2:179631219;179631218;179631217 |
Novex-3 | 3198 | 9817;9818;9819 | chr2:178766492;178766491;178766490 | chr2:179631219;179631218;179631217 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1035580252 | None | 0.884 | D | 0.553 | 0.318 | 0.572930072401 | gnomAD-4.0.0 | 1.20035E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3884 | ambiguous | 0.4101 | ambiguous | -1.271 | Destabilizing | 0.028 | N | 0.234 | neutral | N | 0.505038171 | None | None | N |
V/C | 0.9381 | likely_pathogenic | 0.9478 | pathogenic | -0.69 | Destabilizing | 0.996 | D | 0.51 | neutral | None | None | None | None | N |
V/D | 0.8645 | likely_pathogenic | 0.8979 | pathogenic | -1.197 | Destabilizing | 0.91 | D | 0.579 | neutral | None | None | None | None | N |
V/E | 0.6684 | likely_pathogenic | 0.7313 | pathogenic | -1.208 | Destabilizing | 0.884 | D | 0.565 | neutral | N | 0.509764227 | None | None | N |
V/F | 0.5335 | ambiguous | 0.6205 | pathogenic | -0.995 | Destabilizing | 0.91 | D | 0.535 | neutral | None | None | None | None | N |
V/G | 0.668 | likely_pathogenic | 0.6847 | pathogenic | -1.561 | Destabilizing | 0.684 | D | 0.571 | neutral | N | 0.508318961 | None | None | N |
V/H | 0.9129 | likely_pathogenic | 0.9321 | pathogenic | -1.118 | Destabilizing | 0.996 | D | 0.577 | neutral | None | None | None | None | N |
V/I | 0.0975 | likely_benign | 0.1206 | benign | -0.581 | Destabilizing | 0.004 | N | 0.233 | neutral | None | None | None | None | N |
V/K | 0.6813 | likely_pathogenic | 0.7608 | pathogenic | -1.13 | Destabilizing | 0.91 | D | 0.564 | neutral | None | None | None | None | N |
V/L | 0.5513 | ambiguous | 0.6184 | pathogenic | -0.581 | Destabilizing | 0.134 | N | 0.361 | neutral | D | 0.532895693 | None | None | N |
V/M | 0.3292 | likely_benign | 0.3856 | ambiguous | -0.403 | Destabilizing | 0.884 | D | 0.553 | neutral | D | 0.533917134 | None | None | N |
V/N | 0.7307 | likely_pathogenic | 0.7915 | pathogenic | -0.884 | Destabilizing | 0.91 | D | 0.597 | neutral | None | None | None | None | N |
V/P | 0.9231 | likely_pathogenic | 0.929 | pathogenic | -0.776 | Destabilizing | 0.953 | D | 0.587 | neutral | None | None | None | None | N |
V/Q | 0.6513 | likely_pathogenic | 0.6944 | pathogenic | -1.058 | Destabilizing | 0.953 | D | 0.589 | neutral | None | None | None | None | N |
V/R | 0.6252 | likely_pathogenic | 0.7131 | pathogenic | -0.582 | Destabilizing | 0.953 | D | 0.601 | neutral | None | None | None | None | N |
V/S | 0.5235 | ambiguous | 0.5589 | ambiguous | -1.322 | Destabilizing | 0.59 | D | 0.559 | neutral | None | None | None | None | N |
V/T | 0.2832 | likely_benign | 0.2985 | benign | -1.231 | Destabilizing | 0.016 | N | 0.238 | neutral | None | None | None | None | N |
V/W | 0.9663 | likely_pathogenic | 0.9781 | pathogenic | -1.206 | Destabilizing | 0.996 | D | 0.621 | neutral | None | None | None | None | N |
V/Y | 0.9025 | likely_pathogenic | 0.9372 | pathogenic | -0.913 | Destabilizing | 0.953 | D | 0.535 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.