Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31989 | 96190;96191;96192 | chr2:178544264;178544263;178544262 | chr2:179408991;179408990;179408989 |
N2AB | 30348 | 91267;91268;91269 | chr2:178544264;178544263;178544262 | chr2:179408991;179408990;179408989 |
N2A | 29421 | 88486;88487;88488 | chr2:178544264;178544263;178544262 | chr2:179408991;179408990;179408989 |
N2B | 22924 | 68995;68996;68997 | chr2:178544264;178544263;178544262 | chr2:179408991;179408990;179408989 |
Novex-1 | 23049 | 69370;69371;69372 | chr2:178544264;178544263;178544262 | chr2:179408991;179408990;179408989 |
Novex-2 | 23116 | 69571;69572;69573 | chr2:178544264;178544263;178544262 | chr2:179408991;179408990;179408989 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs775762346 | None | 1.0 | N | 0.738 | 0.475 | 0.0551355673512 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/K | rs775762346 | None | 1.0 | N | 0.738 | 0.475 | 0.0551355673512 | gnomAD-4.0.0 | 3.09866E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.23822E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9692 | likely_pathogenic | 0.9633 | pathogenic | -0.695 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
N/C | 0.8773 | likely_pathogenic | 0.8539 | pathogenic | -0.55 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
N/D | 0.9403 | likely_pathogenic | 0.9347 | pathogenic | -2.17 | Highly Destabilizing | 0.999 | D | 0.593 | neutral | D | 0.526498606 | None | None | I |
N/E | 0.996 | likely_pathogenic | 0.9951 | pathogenic | -2.012 | Highly Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | I |
N/F | 0.9977 | likely_pathogenic | 0.9969 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
N/G | 0.9217 | likely_pathogenic | 0.911 | pathogenic | -1.009 | Destabilizing | 0.999 | D | 0.551 | neutral | None | None | None | None | I |
N/H | 0.9097 | likely_pathogenic | 0.9034 | pathogenic | -0.72 | Destabilizing | 1.0 | D | 0.769 | deleterious | D | 0.539033453 | None | None | I |
N/I | 0.9812 | likely_pathogenic | 0.976 | pathogenic | 0.106 | Stabilizing | 1.0 | D | 0.792 | deleterious | D | 0.539540432 | None | None | I |
N/K | 0.9963 | likely_pathogenic | 0.9957 | pathogenic | -0.264 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | N | 0.52016873 | None | None | I |
N/L | 0.9517 | likely_pathogenic | 0.9377 | pathogenic | 0.106 | Stabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
N/M | 0.9797 | likely_pathogenic | 0.9747 | pathogenic | 0.327 | Stabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | I |
N/P | 0.9923 | likely_pathogenic | 0.9906 | pathogenic | -0.133 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
N/Q | 0.9938 | likely_pathogenic | 0.993 | pathogenic | -1.171 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
N/R | 0.9939 | likely_pathogenic | 0.9925 | pathogenic | -0.22 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
N/S | 0.4296 | ambiguous | 0.4163 | ambiguous | -1.066 | Destabilizing | 0.999 | D | 0.575 | neutral | N | 0.491376052 | None | None | I |
N/T | 0.7672 | likely_pathogenic | 0.7704 | pathogenic | -0.755 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | N | 0.490447318 | None | None | I |
N/V | 0.9745 | likely_pathogenic | 0.9686 | pathogenic | -0.133 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
N/W | 0.9992 | likely_pathogenic | 0.9989 | pathogenic | -0.547 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
N/Y | 0.9806 | likely_pathogenic | 0.9751 | pathogenic | -0.134 | Destabilizing | 1.0 | D | 0.797 | deleterious | D | 0.539286943 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.