Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3199 | 9820;9821;9822 | chr2:178766489;178766488;178766487 | chr2:179631216;179631215;179631214 |
N2AB | 3199 | 9820;9821;9822 | chr2:178766489;178766488;178766487 | chr2:179631216;179631215;179631214 |
N2A | 3199 | 9820;9821;9822 | chr2:178766489;178766488;178766487 | chr2:179631216;179631215;179631214 |
N2B | 3153 | 9682;9683;9684 | chr2:178766489;178766488;178766487 | chr2:179631216;179631215;179631214 |
Novex-1 | 3153 | 9682;9683;9684 | chr2:178766489;178766488;178766487 | chr2:179631216;179631215;179631214 |
Novex-2 | 3153 | 9682;9683;9684 | chr2:178766489;178766488;178766487 | chr2:179631216;179631215;179631214 |
Novex-3 | 3199 | 9820;9821;9822 | chr2:178766489;178766488;178766487 | chr2:179631216;179631215;179631214 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs2090451326 | None | 0.993 | D | 0.456 | 0.432 | 0.527251791467 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs2090451326 | None | 0.993 | D | 0.456 | 0.432 | 0.527251791467 | gnomAD-4.0.0 | 6.56883E-06 | None | None | None | None | N | None | 2.4115E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.7681 | likely_pathogenic | 0.7866 | pathogenic | -0.542 | Destabilizing | 0.91 | D | 0.475 | neutral | D | 0.586473993 | None | None | N |
E/C | 0.994 | likely_pathogenic | 0.994 | pathogenic | -0.368 | Destabilizing | 1.0 | D | 0.585 | neutral | None | None | None | None | N |
E/D | 0.6177 | likely_pathogenic | 0.5447 | ambiguous | -0.577 | Destabilizing | 0.993 | D | 0.431 | neutral | N | 0.496941844 | None | None | N |
E/F | 0.9871 | likely_pathogenic | 0.9884 | pathogenic | -0.127 | Destabilizing | 0.996 | D | 0.555 | neutral | None | None | None | None | N |
E/G | 0.8079 | likely_pathogenic | 0.8254 | pathogenic | -0.811 | Destabilizing | 0.993 | D | 0.456 | neutral | D | 0.589806444 | None | None | N |
E/H | 0.9492 | likely_pathogenic | 0.9557 | pathogenic | -0.026 | Destabilizing | 1.0 | D | 0.387 | neutral | None | None | None | None | N |
E/I | 0.9283 | likely_pathogenic | 0.9299 | pathogenic | 0.159 | Stabilizing | 0.304 | N | 0.359 | neutral | None | None | None | None | N |
E/K | 0.811 | likely_pathogenic | 0.8673 | pathogenic | -0.138 | Destabilizing | 0.993 | D | 0.431 | neutral | D | 0.581899044 | None | None | N |
E/L | 0.9424 | likely_pathogenic | 0.9406 | pathogenic | 0.159 | Stabilizing | 0.871 | D | 0.492 | neutral | None | None | None | None | N |
E/M | 0.9496 | likely_pathogenic | 0.9545 | pathogenic | 0.219 | Stabilizing | 0.996 | D | 0.525 | neutral | None | None | None | None | N |
E/N | 0.892 | likely_pathogenic | 0.8921 | pathogenic | -0.575 | Destabilizing | 0.999 | D | 0.378 | neutral | None | None | None | None | N |
E/P | 0.9968 | likely_pathogenic | 0.9963 | pathogenic | -0.054 | Destabilizing | 0.999 | D | 0.439 | neutral | None | None | None | None | N |
E/Q | 0.5481 | ambiguous | 0.6333 | pathogenic | -0.482 | Destabilizing | 0.998 | D | 0.393 | neutral | N | 0.513640922 | None | None | N |
E/R | 0.888 | likely_pathogenic | 0.914 | pathogenic | 0.195 | Stabilizing | 0.999 | D | 0.379 | neutral | None | None | None | None | N |
E/S | 0.7877 | likely_pathogenic | 0.8029 | pathogenic | -0.762 | Destabilizing | 0.995 | D | 0.399 | neutral | None | None | None | None | N |
E/T | 0.8663 | likely_pathogenic | 0.8759 | pathogenic | -0.543 | Destabilizing | 0.985 | D | 0.455 | neutral | None | None | None | None | N |
E/V | 0.8387 | likely_pathogenic | 0.8505 | pathogenic | -0.054 | Destabilizing | 0.835 | D | 0.451 | neutral | N | 0.513138986 | None | None | N |
E/W | 0.9953 | likely_pathogenic | 0.9958 | pathogenic | 0.092 | Stabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
E/Y | 0.98 | likely_pathogenic | 0.9815 | pathogenic | 0.11 | Stabilizing | 0.999 | D | 0.519 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.