Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31993 | 96202;96203;96204 | chr2:178544252;178544251;178544250 | chr2:179408979;179408978;179408977 |
N2AB | 30352 | 91279;91280;91281 | chr2:178544252;178544251;178544250 | chr2:179408979;179408978;179408977 |
N2A | 29425 | 88498;88499;88500 | chr2:178544252;178544251;178544250 | chr2:179408979;179408978;179408977 |
N2B | 22928 | 69007;69008;69009 | chr2:178544252;178544251;178544250 | chr2:179408979;179408978;179408977 |
Novex-1 | 23053 | 69382;69383;69384 | chr2:178544252;178544251;178544250 | chr2:179408979;179408978;179408977 |
Novex-2 | 23120 | 69583;69584;69585 | chr2:178544252;178544251;178544250 | chr2:179408979;179408978;179408977 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs749913152 | 0.119 | None | N | 0.193 | 0.08 | 0.356897458496 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
M/I | rs749913152 | 0.119 | None | N | 0.193 | 0.08 | 0.356897458496 | gnomAD-4.0.0 | 6.84229E-07 | None | None | None | None | I | None | 2.98811E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/L | None | None | 0.003 | N | 0.181 | 0.121 | 0.459995458672 | gnomAD-4.0.0 | 3.1827E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71719E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.2815 | likely_benign | 0.2949 | benign | -0.838 | Destabilizing | 0.025 | N | 0.336 | neutral | None | None | None | None | I |
M/C | 0.5928 | likely_pathogenic | 0.5872 | pathogenic | -0.772 | Destabilizing | 0.859 | D | 0.538 | neutral | None | None | None | None | I |
M/D | 0.7149 | likely_pathogenic | 0.693 | pathogenic | 0.491 | Stabilizing | 0.22 | N | 0.567 | neutral | None | None | None | None | I |
M/E | 0.3551 | ambiguous | 0.3464 | ambiguous | 0.488 | Stabilizing | 0.055 | N | 0.505 | neutral | None | None | None | None | I |
M/F | 0.2266 | likely_benign | 0.2299 | benign | -0.114 | Destabilizing | 0.22 | N | 0.439 | neutral | None | None | None | None | I |
M/G | 0.5104 | ambiguous | 0.4988 | ambiguous | -1.092 | Destabilizing | 0.104 | N | 0.511 | neutral | None | None | None | None | I |
M/H | 0.4294 | ambiguous | 0.4292 | ambiguous | -0.111 | Destabilizing | 0.667 | D | 0.588 | neutral | None | None | None | None | I |
M/I | 0.2123 | likely_benign | 0.2076 | benign | -0.233 | Destabilizing | None | N | 0.193 | neutral | N | 0.412905988 | None | None | I |
M/K | 0.1591 | likely_benign | 0.1467 | benign | 0.257 | Stabilizing | None | N | 0.279 | neutral | N | 0.436148207 | None | None | I |
M/L | 0.1005 | likely_benign | 0.1015 | benign | -0.233 | Destabilizing | 0.003 | N | 0.181 | neutral | N | 0.404670507 | None | None | I |
M/N | 0.3567 | ambiguous | 0.3556 | ambiguous | 0.342 | Stabilizing | 0.22 | N | 0.565 | neutral | None | None | None | None | I |
M/P | 0.4076 | ambiguous | 0.4277 | ambiguous | -0.405 | Destabilizing | 0.364 | N | 0.561 | neutral | None | None | None | None | I |
M/Q | 0.2016 | likely_benign | 0.1989 | benign | 0.262 | Stabilizing | 0.22 | N | 0.422 | neutral | None | None | None | None | I |
M/R | 0.1745 | likely_benign | 0.1602 | benign | 0.689 | Stabilizing | 0.096 | N | 0.457 | neutral | N | 0.44476769 | None | None | I |
M/S | 0.3241 | likely_benign | 0.3315 | benign | -0.268 | Destabilizing | 0.055 | N | 0.44 | neutral | None | None | None | None | I |
M/T | 0.1585 | likely_benign | 0.1654 | benign | -0.151 | Destabilizing | None | N | 0.273 | neutral | N | 0.440111232 | None | None | I |
M/V | 0.0851 | likely_benign | 0.0831 | benign | -0.405 | Destabilizing | None | N | 0.194 | neutral | N | 0.422178832 | None | None | I |
M/W | 0.5435 | ambiguous | 0.5226 | ambiguous | -0.063 | Destabilizing | 0.958 | D | 0.531 | neutral | None | None | None | None | I |
M/Y | 0.4355 | ambiguous | 0.4283 | ambiguous | 0.023 | Stabilizing | 0.364 | N | 0.574 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.