Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31998 | 96217;96218;96219 | chr2:178544237;178544236;178544235 | chr2:179408964;179408963;179408962 |
N2AB | 30357 | 91294;91295;91296 | chr2:178544237;178544236;178544235 | chr2:179408964;179408963;179408962 |
N2A | 29430 | 88513;88514;88515 | chr2:178544237;178544236;178544235 | chr2:179408964;179408963;179408962 |
N2B | 22933 | 69022;69023;69024 | chr2:178544237;178544236;178544235 | chr2:179408964;179408963;179408962 |
Novex-1 | 23058 | 69397;69398;69399 | chr2:178544237;178544236;178544235 | chr2:179408964;179408963;179408962 |
Novex-2 | 23125 | 69598;69599;69600 | chr2:178544237;178544236;178544235 | chr2:179408964;179408963;179408962 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1181902339 | -0.089 | 0.996 | N | 0.718 | 0.332 | 0.377451072189 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
E/A | rs1181902339 | -0.089 | 0.996 | N | 0.718 | 0.332 | 0.377451072189 | gnomAD-4.0.0 | 3.18339E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71916E-06 | 0 | 0 |
E/K | rs775585263 | 0.869 | 0.999 | N | 0.698 | 0.302 | 0.33440975612 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
E/K | rs775585263 | 0.869 | 0.999 | N | 0.698 | 0.302 | 0.33440975612 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.92753E-04 | None | 0 | 0 | 1.47E-05 | 2.06954E-04 | 0 |
E/K | rs775585263 | 0.869 | 0.999 | N | 0.698 | 0.302 | 0.33440975612 | gnomAD-4.0.0 | 1.73542E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 4.45653E-05 | None | 0 | 0 | 1.78028E-05 | 4.39203E-05 | 1.60128E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1331 | likely_benign | 0.1342 | benign | -0.009 | Destabilizing | 0.996 | D | 0.718 | prob.delet. | N | 0.484347585 | None | None | I |
E/C | 0.7096 | likely_pathogenic | 0.7407 | pathogenic | 0.104 | Stabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
E/D | 0.089 | likely_benign | 0.1005 | benign | -0.206 | Destabilizing | 0.262 | N | 0.277 | neutral | N | 0.451080374 | None | None | I |
E/F | 0.6355 | likely_pathogenic | 0.6507 | pathogenic | -0.109 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
E/G | 0.1435 | likely_benign | 0.141 | benign | -0.12 | Destabilizing | 0.999 | D | 0.637 | neutral | N | 0.503645422 | None | None | I |
E/H | 0.375 | ambiguous | 0.3826 | ambiguous | 0.332 | Stabilizing | 1.0 | D | 0.699 | prob.delet. | None | None | None | None | I |
E/I | 0.3128 | likely_benign | 0.3115 | benign | 0.221 | Stabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
E/K | 0.1332 | likely_benign | 0.1281 | benign | 0.599 | Stabilizing | 0.999 | D | 0.698 | prob.delet. | N | 0.511995547 | None | None | I |
E/L | 0.329 | likely_benign | 0.3336 | benign | 0.221 | Stabilizing | 1.0 | D | 0.734 | deleterious | None | None | None | None | I |
E/M | 0.4043 | ambiguous | 0.4094 | ambiguous | 0.169 | Stabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
E/N | 0.1731 | likely_benign | 0.1887 | benign | 0.399 | Stabilizing | 0.998 | D | 0.738 | deleterious | None | None | None | None | I |
E/P | 0.2974 | likely_benign | 0.3379 | benign | 0.162 | Stabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
E/Q | 0.1369 | likely_benign | 0.1371 | benign | 0.405 | Stabilizing | 1.0 | D | 0.733 | deleterious | N | 0.496468734 | None | None | I |
E/R | 0.2357 | likely_benign | 0.2321 | benign | 0.693 | Stabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | I |
E/S | 0.1469 | likely_benign | 0.1534 | benign | 0.27 | Stabilizing | 0.993 | D | 0.683 | prob.neutral | None | None | None | None | I |
E/T | 0.1706 | likely_benign | 0.178 | benign | 0.369 | Stabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | I |
E/V | 0.1895 | likely_benign | 0.1865 | benign | 0.162 | Stabilizing | 1.0 | D | 0.751 | deleterious | N | 0.496604807 | None | None | I |
E/W | 0.8558 | likely_pathogenic | 0.8605 | pathogenic | -0.079 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
E/Y | 0.5093 | ambiguous | 0.5255 | ambiguous | 0.115 | Stabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.