Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3199896217;96218;96219 chr2:178544237;178544236;178544235chr2:179408964;179408963;179408962
N2AB3035791294;91295;91296 chr2:178544237;178544236;178544235chr2:179408964;179408963;179408962
N2A2943088513;88514;88515 chr2:178544237;178544236;178544235chr2:179408964;179408963;179408962
N2B2293369022;69023;69024 chr2:178544237;178544236;178544235chr2:179408964;179408963;179408962
Novex-12305869397;69398;69399 chr2:178544237;178544236;178544235chr2:179408964;179408963;179408962
Novex-22312569598;69599;69600 chr2:178544237;178544236;178544235chr2:179408964;179408963;179408962
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: E
  • RefSeq wild type transcript codon: GAA
  • RefSeq wild type template codon: CTT
  • Domain: Fn3-121
  • Domain position: 90
  • Structural Position: 122
  • Q(SASA): 0.7894
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
E/A rs1181902339 -0.089 0.996 N 0.718 0.332 0.377451072189 gnomAD-2.1.1 4.03E-06 None None None None I None 0 0 None 0 0 None 0 None 0 8.9E-06 0
E/A rs1181902339 -0.089 0.996 N 0.718 0.332 0.377451072189 gnomAD-4.0.0 3.18339E-06 None None None None I None 0 0 None 0 0 None 0 0 5.71916E-06 0 0
E/K rs775585263 0.869 0.999 N 0.698 0.302 0.33440975612 gnomAD-2.1.1 8.05E-06 None None None None I None 0 0 None 0 0 None 6.54E-05 None 0 0 0
E/K rs775585263 0.869 0.999 N 0.698 0.302 0.33440975612 gnomAD-3.1.2 1.97E-05 None None None None I None 0 0 0 0 1.92753E-04 None 0 0 1.47E-05 2.06954E-04 0
E/K rs775585263 0.869 0.999 N 0.698 0.302 0.33440975612 gnomAD-4.0.0 1.73542E-05 None None None None I None 0 0 None 0 4.45653E-05 None 0 0 1.78028E-05 4.39203E-05 1.60128E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
E/A 0.1331 likely_benign 0.1342 benign -0.009 Destabilizing 0.996 D 0.718 prob.delet. N 0.484347585 None None I
E/C 0.7096 likely_pathogenic 0.7407 pathogenic 0.104 Stabilizing 1.0 D 0.823 deleterious None None None None I
E/D 0.089 likely_benign 0.1005 benign -0.206 Destabilizing 0.262 N 0.277 neutral N 0.451080374 None None I
E/F 0.6355 likely_pathogenic 0.6507 pathogenic -0.109 Destabilizing 1.0 D 0.781 deleterious None None None None I
E/G 0.1435 likely_benign 0.141 benign -0.12 Destabilizing 0.999 D 0.637 neutral N 0.503645422 None None I
E/H 0.375 ambiguous 0.3826 ambiguous 0.332 Stabilizing 1.0 D 0.699 prob.delet. None None None None I
E/I 0.3128 likely_benign 0.3115 benign 0.221 Stabilizing 1.0 D 0.792 deleterious None None None None I
E/K 0.1332 likely_benign 0.1281 benign 0.599 Stabilizing 0.999 D 0.698 prob.delet. N 0.511995547 None None I
E/L 0.329 likely_benign 0.3336 benign 0.221 Stabilizing 1.0 D 0.734 deleterious None None None None I
E/M 0.4043 ambiguous 0.4094 ambiguous 0.169 Stabilizing 1.0 D 0.814 deleterious None None None None I
E/N 0.1731 likely_benign 0.1887 benign 0.399 Stabilizing 0.998 D 0.738 deleterious None None None None I
E/P 0.2974 likely_benign 0.3379 benign 0.162 Stabilizing 1.0 D 0.803 deleterious None None None None I
E/Q 0.1369 likely_benign 0.1371 benign 0.405 Stabilizing 1.0 D 0.733 deleterious N 0.496468734 None None I
E/R 0.2357 likely_benign 0.2321 benign 0.693 Stabilizing 0.999 D 0.764 deleterious None None None None I
E/S 0.1469 likely_benign 0.1534 benign 0.27 Stabilizing 0.993 D 0.683 prob.neutral None None None None I
E/T 0.1706 likely_benign 0.178 benign 0.369 Stabilizing 0.999 D 0.711 prob.delet. None None None None I
E/V 0.1895 likely_benign 0.1865 benign 0.162 Stabilizing 1.0 D 0.751 deleterious N 0.496604807 None None I
E/W 0.8558 likely_pathogenic 0.8605 pathogenic -0.079 Destabilizing 1.0 D 0.819 deleterious None None None None I
E/Y 0.5093 ambiguous 0.5255 ambiguous 0.115 Stabilizing 1.0 D 0.791 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.