Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32002 | 96229;96230;96231 | chr2:178544225;178544224;178544223 | chr2:179408952;179408951;179408950 |
N2AB | 30361 | 91306;91307;91308 | chr2:178544225;178544224;178544223 | chr2:179408952;179408951;179408950 |
N2A | 29434 | 88525;88526;88527 | chr2:178544225;178544224;178544223 | chr2:179408952;179408951;179408950 |
N2B | 22937 | 69034;69035;69036 | chr2:178544225;178544224;178544223 | chr2:179408952;179408951;179408950 |
Novex-1 | 23062 | 69409;69410;69411 | chr2:178544225;178544224;178544223 | chr2:179408952;179408951;179408950 |
Novex-2 | 23129 | 69610;69611;69612 | chr2:178544225;178544224;178544223 | chr2:179408952;179408951;179408950 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.181 | N | 0.457 | 0.11 | 0.241078983079 | gnomAD-4.0.0 | 2.05345E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69969E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1009 | likely_benign | 0.1082 | benign | -0.55 | Destabilizing | 0.044 | N | 0.443 | neutral | N | 0.367494277 | None | None | N |
E/C | 0.6915 | likely_pathogenic | 0.7435 | pathogenic | -0.155 | Destabilizing | 0.96 | D | 0.649 | prob.neutral | None | None | None | None | N |
E/D | 0.1223 | likely_benign | 0.1332 | benign | -0.53 | Destabilizing | 0.181 | N | 0.457 | neutral | N | 0.475200532 | None | None | N |
E/F | 0.6301 | likely_pathogenic | 0.653 | pathogenic | -0.319 | Destabilizing | 0.507 | D | 0.613 | neutral | None | None | None | None | N |
E/G | 0.1373 | likely_benign | 0.1408 | benign | -0.783 | Destabilizing | 0.181 | N | 0.539 | neutral | N | 0.494306368 | None | None | N |
E/H | 0.4116 | ambiguous | 0.4312 | ambiguous | -0.18 | Destabilizing | 0.676 | D | 0.448 | neutral | None | None | None | None | N |
E/I | 0.246 | likely_benign | 0.2463 | benign | 0.043 | Stabilizing | 0.002 | N | 0.506 | neutral | None | None | None | None | N |
E/K | 0.1558 | likely_benign | 0.1523 | benign | 0.127 | Stabilizing | 0.001 | N | 0.342 | neutral | N | 0.461135157 | None | None | N |
E/L | 0.2952 | likely_benign | 0.3128 | benign | 0.043 | Stabilizing | 0.128 | N | 0.561 | neutral | None | None | None | None | N |
E/M | 0.3273 | likely_benign | 0.3449 | ambiguous | 0.207 | Stabilizing | 0.795 | D | 0.584 | neutral | None | None | None | None | N |
E/N | 0.1981 | likely_benign | 0.2168 | benign | -0.253 | Destabilizing | 0.227 | N | 0.441 | neutral | None | None | None | None | N |
E/P | 0.2761 | likely_benign | 0.2863 | benign | -0.134 | Destabilizing | 0.676 | D | 0.538 | neutral | None | None | None | None | N |
E/Q | 0.1351 | likely_benign | 0.1362 | benign | -0.207 | Destabilizing | 0.1 | N | 0.506 | neutral | N | 0.487513682 | None | None | N |
E/R | 0.2649 | likely_benign | 0.2622 | benign | 0.374 | Stabilizing | 0.002 | N | 0.34 | neutral | None | None | None | None | N |
E/S | 0.149 | likely_benign | 0.1623 | benign | -0.426 | Destabilizing | 0.128 | N | 0.392 | neutral | None | None | None | None | N |
E/T | 0.16 | likely_benign | 0.1652 | benign | -0.236 | Destabilizing | 0.004 | N | 0.314 | neutral | None | None | None | None | N |
E/V | 0.1486 | likely_benign | 0.1488 | benign | -0.134 | Destabilizing | 0.1 | N | 0.545 | neutral | N | 0.433007193 | None | None | N |
E/W | 0.8313 | likely_pathogenic | 0.8429 | pathogenic | -0.117 | Destabilizing | 0.96 | D | 0.619 | neutral | None | None | None | None | N |
E/Y | 0.519 | ambiguous | 0.5511 | ambiguous | -0.066 | Destabilizing | 0.864 | D | 0.597 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.