Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32022 | 96289;96290;96291 | chr2:178544080;178544079;178544078 | chr2:179408807;179408806;179408805 |
N2AB | 30381 | 91366;91367;91368 | chr2:178544080;178544079;178544078 | chr2:179408807;179408806;179408805 |
N2A | 29454 | 88585;88586;88587 | chr2:178544080;178544079;178544078 | chr2:179408807;179408806;179408805 |
N2B | 22957 | 69094;69095;69096 | chr2:178544080;178544079;178544078 | chr2:179408807;179408806;179408805 |
Novex-1 | 23082 | 69469;69470;69471 | chr2:178544080;178544079;178544078 | chr2:179408807;179408806;179408805 |
Novex-2 | 23149 | 69670;69671;69672 | chr2:178544080;178544079;178544078 | chr2:179408807;179408806;179408805 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.946 | N | 0.648 | 0.43 | 0.343560092441 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7544 | likely_pathogenic | 0.7021 | pathogenic | 0.058 | Stabilizing | 0.87 | D | 0.591 | neutral | None | None | None | None | N |
K/C | 0.9041 | likely_pathogenic | 0.888 | pathogenic | -0.096 | Destabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/D | 0.8036 | likely_pathogenic | 0.7457 | pathogenic | 0.069 | Stabilizing | 0.959 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/E | 0.5311 | ambiguous | 0.434 | ambiguous | 0.069 | Stabilizing | 0.716 | D | 0.568 | neutral | N | 0.512473628 | None | None | N |
K/F | 0.9682 | likely_pathogenic | 0.9533 | pathogenic | -0.174 | Destabilizing | 0.994 | D | 0.688 | prob.neutral | None | None | None | None | N |
K/G | 0.7368 | likely_pathogenic | 0.6803 | pathogenic | -0.134 | Destabilizing | 0.959 | D | 0.516 | neutral | None | None | None | None | N |
K/H | 0.5589 | ambiguous | 0.4992 | ambiguous | -0.424 | Destabilizing | 0.994 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/I | 0.8501 | likely_pathogenic | 0.801 | pathogenic | 0.482 | Stabilizing | 0.979 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/L | 0.7808 | likely_pathogenic | 0.7166 | pathogenic | 0.482 | Stabilizing | 0.959 | D | 0.516 | neutral | None | None | None | None | N |
K/M | 0.653 | likely_pathogenic | 0.5462 | ambiguous | 0.293 | Stabilizing | 0.998 | D | 0.693 | prob.neutral | D | 0.523959344 | None | None | N |
K/N | 0.6772 | likely_pathogenic | 0.5918 | pathogenic | 0.313 | Stabilizing | 0.946 | D | 0.657 | neutral | D | 0.535062486 | None | None | N |
K/P | 0.9361 | likely_pathogenic | 0.9195 | pathogenic | 0.368 | Stabilizing | 0.979 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/Q | 0.2845 | likely_benign | 0.2376 | benign | 0.132 | Stabilizing | 0.946 | D | 0.648 | neutral | N | 0.512473628 | None | None | N |
K/R | 0.1124 | likely_benign | 0.1057 | benign | -0.003 | Destabilizing | 0.035 | N | 0.302 | neutral | N | 0.47737962 | None | None | N |
K/S | 0.7685 | likely_pathogenic | 0.7056 | pathogenic | -0.156 | Destabilizing | 0.87 | D | 0.601 | neutral | None | None | None | None | N |
K/T | 0.5527 | ambiguous | 0.4755 | ambiguous | -0.013 | Destabilizing | 0.946 | D | 0.639 | neutral | N | 0.487786833 | None | None | N |
K/V | 0.7845 | likely_pathogenic | 0.7324 | pathogenic | 0.368 | Stabilizing | 0.959 | D | 0.646 | neutral | None | None | None | None | N |
K/W | 0.9481 | likely_pathogenic | 0.9278 | pathogenic | -0.207 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/Y | 0.8765 | likely_pathogenic | 0.8298 | pathogenic | 0.153 | Stabilizing | 0.979 | D | 0.67 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.