Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32029 | 96310;96311;96312 | chr2:178544059;178544058;178544057 | chr2:179408786;179408785;179408784 |
N2AB | 30388 | 91387;91388;91389 | chr2:178544059;178544058;178544057 | chr2:179408786;179408785;179408784 |
N2A | 29461 | 88606;88607;88608 | chr2:178544059;178544058;178544057 | chr2:179408786;179408785;179408784 |
N2B | 22964 | 69115;69116;69117 | chr2:178544059;178544058;178544057 | chr2:179408786;179408785;179408784 |
Novex-1 | 23089 | 69490;69491;69492 | chr2:178544059;178544058;178544057 | chr2:179408786;179408785;179408784 |
Novex-2 | 23156 | 69691;69692;69693 | chr2:178544059;178544058;178544057 | chr2:179408786;179408785;179408784 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs897097275 | None | 1.0 | D | 0.891 | 0.731 | 0.843450473141 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
G/R | rs897097275 | None | 1.0 | D | 0.891 | 0.731 | 0.843450473141 | gnomAD-4.0.0 | 1.59182E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85941E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4823 | ambiguous | 0.4488 | ambiguous | -0.272 | Destabilizing | 1.0 | D | 0.785 | deleterious | D | 0.630094413 | None | None | I |
G/C | 0.6099 | likely_pathogenic | 0.5749 | pathogenic | -0.874 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
G/D | 0.7736 | likely_pathogenic | 0.7507 | pathogenic | -0.49 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | I |
G/E | 0.8417 | likely_pathogenic | 0.8173 | pathogenic | -0.648 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.61057294 | None | None | I |
G/F | 0.9514 | likely_pathogenic | 0.9386 | pathogenic | -0.967 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
G/H | 0.8768 | likely_pathogenic | 0.8585 | pathogenic | -0.509 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | I |
G/I | 0.9546 | likely_pathogenic | 0.9422 | pathogenic | -0.383 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | I |
G/K | 0.916 | likely_pathogenic | 0.8997 | pathogenic | -0.797 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
G/L | 0.9049 | likely_pathogenic | 0.8843 | pathogenic | -0.383 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | I |
G/M | 0.9106 | likely_pathogenic | 0.8905 | pathogenic | -0.431 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
G/N | 0.6487 | likely_pathogenic | 0.6249 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | I |
G/P | 0.9938 | likely_pathogenic | 0.9919 | pathogenic | -0.312 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
G/Q | 0.8177 | likely_pathogenic | 0.788 | pathogenic | -0.733 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | I |
G/R | 0.8251 | likely_pathogenic | 0.788 | pathogenic | -0.359 | Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.639582803 | None | None | I |
G/S | 0.2733 | likely_benign | 0.2563 | benign | -0.626 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | I |
G/T | 0.6591 | likely_pathogenic | 0.638 | pathogenic | -0.709 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | I |
G/V | 0.8834 | likely_pathogenic | 0.86 | pathogenic | -0.312 | Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.672055494 | None | None | I |
G/W | 0.9273 | likely_pathogenic | 0.9043 | pathogenic | -1.13 | Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.672257298 | None | None | I |
G/Y | 0.9203 | likely_pathogenic | 0.9011 | pathogenic | -0.772 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.