Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32032 | 96319;96320;96321 | chr2:178544050;178544049;178544048 | chr2:179408777;179408776;179408775 |
N2AB | 30391 | 91396;91397;91398 | chr2:178544050;178544049;178544048 | chr2:179408777;179408776;179408775 |
N2A | 29464 | 88615;88616;88617 | chr2:178544050;178544049;178544048 | chr2:179408777;179408776;179408775 |
N2B | 22967 | 69124;69125;69126 | chr2:178544050;178544049;178544048 | chr2:179408777;179408776;179408775 |
Novex-1 | 23092 | 69499;69500;69501 | chr2:178544050;178544049;178544048 | chr2:179408777;179408776;179408775 |
Novex-2 | 23159 | 69700;69701;69702 | chr2:178544050;178544049;178544048 | chr2:179408777;179408776;179408775 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs1267785229 | -2.546 | 0.999 | N | 0.839 | 0.518 | 0.738826834845 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
L/S | rs1267785229 | -2.546 | 0.999 | N | 0.839 | 0.518 | 0.738826834845 | gnomAD-4.0.0 | 1.59166E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85902E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8744 | likely_pathogenic | 0.8494 | pathogenic | -2.513 | Highly Destabilizing | 0.997 | D | 0.708 | prob.delet. | None | None | None | None | I |
L/C | 0.8243 | likely_pathogenic | 0.7962 | pathogenic | -1.925 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
L/D | 0.9993 | likely_pathogenic | 0.9989 | pathogenic | -2.558 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | I |
L/E | 0.9945 | likely_pathogenic | 0.9919 | pathogenic | -2.326 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
L/F | 0.5806 | likely_pathogenic | 0.4816 | ambiguous | -1.518 | Destabilizing | 0.999 | D | 0.786 | deleterious | N | 0.50334906 | None | None | I |
L/G | 0.9844 | likely_pathogenic | 0.978 | pathogenic | -3.042 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
L/H | 0.9854 | likely_pathogenic | 0.9756 | pathogenic | -2.223 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
L/I | 0.199 | likely_benign | 0.1823 | benign | -0.985 | Destabilizing | 0.994 | D | 0.592 | neutral | None | None | None | None | I |
L/K | 0.9908 | likely_pathogenic | 0.9864 | pathogenic | -2.104 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
L/M | 0.2116 | likely_benign | 0.1998 | benign | -0.949 | Destabilizing | 0.981 | D | 0.51 | neutral | N | 0.510603106 | None | None | I |
L/N | 0.9941 | likely_pathogenic | 0.9916 | pathogenic | -2.5 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
L/P | 0.9943 | likely_pathogenic | 0.9903 | pathogenic | -1.475 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
L/Q | 0.9672 | likely_pathogenic | 0.9523 | pathogenic | -2.339 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
L/R | 0.9845 | likely_pathogenic | 0.9751 | pathogenic | -1.804 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | I |
L/S | 0.9794 | likely_pathogenic | 0.969 | pathogenic | -3.218 | Highly Destabilizing | 0.999 | D | 0.839 | deleterious | N | 0.506071768 | None | None | I |
L/T | 0.9343 | likely_pathogenic | 0.9084 | pathogenic | -2.823 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
L/V | 0.2182 | likely_benign | 0.1916 | benign | -1.475 | Destabilizing | 0.992 | D | 0.579 | neutral | N | 0.42093832 | None | None | I |
L/W | 0.9658 | likely_pathogenic | 0.9309 | pathogenic | -1.757 | Destabilizing | 1.0 | D | 0.824 | deleterious | N | 0.506578747 | None | None | I |
L/Y | 0.9624 | likely_pathogenic | 0.9393 | pathogenic | -1.505 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.