Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32039 | 96340;96341;96342 | chr2:178544029;178544028;178544027 | chr2:179408756;179408755;179408754 |
N2AB | 30398 | 91417;91418;91419 | chr2:178544029;178544028;178544027 | chr2:179408756;179408755;179408754 |
N2A | 29471 | 88636;88637;88638 | chr2:178544029;178544028;178544027 | chr2:179408756;179408755;179408754 |
N2B | 22974 | 69145;69146;69147 | chr2:178544029;178544028;178544027 | chr2:179408756;179408755;179408754 |
Novex-1 | 23099 | 69520;69521;69522 | chr2:178544029;178544028;178544027 | chr2:179408756;179408755;179408754 |
Novex-2 | 23166 | 69721;69722;69723 | chr2:178544029;178544028;178544027 | chr2:179408756;179408755;179408754 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.079 | N | 0.161 | 0.145 | 0.218112801441 | gnomAD-4.0.0 | 1.59154E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85883E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0808 | likely_benign | 0.076 | benign | -0.192 | Destabilizing | 0.76 | D | 0.358 | neutral | N | 0.464930397 | None | None | N |
S/C | 0.1064 | likely_benign | 0.1012 | benign | -0.383 | Destabilizing | 0.999 | D | 0.561 | neutral | D | 0.533195617 | None | None | N |
S/D | 0.5901 | likely_pathogenic | 0.523 | ambiguous | 0.131 | Stabilizing | 0.953 | D | 0.41 | neutral | None | None | None | None | N |
S/E | 0.6308 | likely_pathogenic | 0.5534 | ambiguous | 0.024 | Stabilizing | 0.953 | D | 0.416 | neutral | None | None | None | None | N |
S/F | 0.1783 | likely_benign | 0.1506 | benign | -0.973 | Destabilizing | 0.991 | D | 0.647 | neutral | N | 0.511030833 | None | None | N |
S/G | 0.119 | likely_benign | 0.1061 | benign | -0.217 | Destabilizing | 0.953 | D | 0.37 | neutral | None | None | None | None | N |
S/H | 0.2862 | likely_benign | 0.2614 | benign | -0.588 | Destabilizing | 0.999 | D | 0.546 | neutral | None | None | None | None | N |
S/I | 0.1555 | likely_benign | 0.1381 | benign | -0.255 | Destabilizing | 0.986 | D | 0.641 | neutral | None | None | None | None | N |
S/K | 0.4999 | ambiguous | 0.4364 | ambiguous | -0.322 | Destabilizing | 0.953 | D | 0.413 | neutral | None | None | None | None | N |
S/L | 0.0959 | likely_benign | 0.0851 | benign | -0.255 | Destabilizing | 0.91 | D | 0.5 | neutral | None | None | None | None | N |
S/M | 0.1643 | likely_benign | 0.1589 | benign | -0.214 | Destabilizing | 0.999 | D | 0.549 | neutral | None | None | None | None | N |
S/N | 0.1593 | likely_benign | 0.1396 | benign | -0.12 | Destabilizing | 0.953 | D | 0.417 | neutral | None | None | None | None | N |
S/P | 0.9055 | likely_pathogenic | 0.8783 | pathogenic | -0.212 | Destabilizing | 0.991 | D | 0.554 | neutral | N | 0.486772874 | None | None | N |
S/Q | 0.4406 | ambiguous | 0.4051 | ambiguous | -0.31 | Destabilizing | 0.993 | D | 0.519 | neutral | None | None | None | None | N |
S/R | 0.4262 | ambiguous | 0.3652 | ambiguous | -0.156 | Destabilizing | 0.986 | D | 0.558 | neutral | None | None | None | None | N |
S/T | 0.0673 | likely_benign | 0.0661 | benign | -0.227 | Destabilizing | 0.079 | N | 0.161 | neutral | N | 0.400764276 | None | None | N |
S/V | 0.1711 | likely_benign | 0.1594 | benign | -0.212 | Destabilizing | 0.91 | D | 0.497 | neutral | None | None | None | None | N |
S/W | 0.363 | ambiguous | 0.3017 | benign | -1.069 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | N |
S/Y | 0.1968 | likely_benign | 0.1685 | benign | -0.743 | Destabilizing | 0.997 | D | 0.641 | neutral | N | 0.521805187 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.