Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32053 | 96382;96383;96384 | chr2:178543987;178543986;178543985 | chr2:179408714;179408713;179408712 |
N2AB | 30412 | 91459;91460;91461 | chr2:178543987;178543986;178543985 | chr2:179408714;179408713;179408712 |
N2A | 29485 | 88678;88679;88680 | chr2:178543987;178543986;178543985 | chr2:179408714;179408713;179408712 |
N2B | 22988 | 69187;69188;69189 | chr2:178543987;178543986;178543985 | chr2:179408714;179408713;179408712 |
Novex-1 | 23113 | 69562;69563;69564 | chr2:178543987;178543986;178543985 | chr2:179408714;179408713;179408712 |
Novex-2 | 23180 | 69763;69764;69765 | chr2:178543987;178543986;178543985 | chr2:179408714;179408713;179408712 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs906167122 | None | 0.939 | N | 0.341 | 0.175 | 0.634385825132 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/M | rs906167122 | None | 0.939 | N | 0.341 | 0.175 | 0.634385825132 | gnomAD-4.0.0 | 4.95805E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.78133E-06 | 0 | 0 |
I/T | rs62621236 | -0.092 | 0.028 | N | 0.239 | 0.224 | None | gnomAD-2.1.1 | 8.3463E-02 | None | None | None | None | N | None | 1.45303E-01 | 2.02449E-01 | None | 2.97642E-02 | 2.7607E-02 | None | 1.82876E-01 | None | 5.70709E-02 | 3.42392E-02 | 6.49369E-02 |
I/T | rs62621236 | -0.092 | 0.028 | N | 0.239 | 0.224 | None | gnomAD-3.1.2 | 8.3273E-02 | None | None | None | None | N | None | 1.44115E-01 | 1.65224E-01 | 4.93421E-02 | 2.9683E-02 | 2.49227E-02 | None | 5.83632E-02 | 8.22785E-02 | 3.30608E-02 | 1.78068E-01 | 7.12237E-02 |
I/T | rs62621236 | -0.092 | 0.028 | N | 0.239 | 0.224 | None | 1000 genomes | 1.15815E-01 | None | None | None | None | N | None | 1.46E-01 | 1.643E-01 | None | None | 2.58E-02 | 5.17E-02 | None | None | None | 1.994E-01 | None |
I/T | rs62621236 | -0.092 | 0.028 | N | 0.239 | 0.224 | None | gnomAD-4.0.0 | 5.45041E-02 | None | None | None | None | N | None | 1.47681E-01 | 1.91307E-01 | None | 2.93621E-02 | 1.50914E-02 | None | 5.90874E-02 | 5.49868E-02 | 3.39113E-02 | 1.7511E-01 | 5.99808E-02 |
I/V | None | None | 0.001 | N | 0.169 | 0.08 | 0.355658859761 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1381 | likely_benign | 0.1512 | benign | -1.115 | Destabilizing | 0.373 | N | 0.318 | neutral | None | None | None | None | N |
I/C | 0.4378 | ambiguous | 0.4795 | ambiguous | -0.732 | Destabilizing | 0.996 | D | 0.343 | neutral | None | None | None | None | N |
I/D | 0.4299 | ambiguous | 0.4537 | ambiguous | -0.482 | Destabilizing | 0.953 | D | 0.415 | neutral | None | None | None | None | N |
I/E | 0.3359 | likely_benign | 0.3539 | ambiguous | -0.522 | Destabilizing | 0.953 | D | 0.391 | neutral | None | None | None | None | N |
I/F | 0.1223 | likely_benign | 0.1301 | benign | -0.845 | Destabilizing | 0.884 | D | 0.304 | neutral | N | 0.486863108 | None | None | N |
I/G | 0.3157 | likely_benign | 0.3589 | ambiguous | -1.374 | Destabilizing | 0.854 | D | 0.413 | neutral | None | None | None | None | N |
I/H | 0.3199 | likely_benign | 0.3525 | ambiguous | -0.64 | Destabilizing | 0.996 | D | 0.418 | neutral | None | None | None | None | N |
I/K | 0.2351 | likely_benign | 0.2488 | benign | -0.755 | Destabilizing | 0.953 | D | 0.395 | neutral | None | None | None | None | N |
I/L | 0.0978 | likely_benign | 0.1014 | benign | -0.516 | Destabilizing | 0.164 | N | 0.225 | neutral | N | 0.453750612 | None | None | N |
I/M | 0.0739 | likely_benign | 0.0769 | benign | -0.464 | Destabilizing | 0.939 | D | 0.341 | neutral | N | 0.47689683 | None | None | N |
I/N | 0.1437 | likely_benign | 0.156 | benign | -0.53 | Destabilizing | 0.939 | D | 0.424 | neutral | N | 0.473875168 | None | None | N |
I/P | 0.62 | likely_pathogenic | 0.6182 | pathogenic | -0.683 | Destabilizing | 0.984 | D | 0.419 | neutral | None | None | None | None | N |
I/Q | 0.2511 | likely_benign | 0.2753 | benign | -0.704 | Destabilizing | 0.984 | D | 0.416 | neutral | None | None | None | None | N |
I/R | 0.1959 | likely_benign | 0.2047 | benign | -0.204 | Destabilizing | 0.953 | D | 0.42 | neutral | None | None | None | None | N |
I/S | 0.1331 | likely_benign | 0.1433 | benign | -1.066 | Destabilizing | 0.521 | D | 0.367 | neutral | N | 0.426041148 | None | None | N |
I/T | 0.0811 | likely_benign | 0.0898 | benign | -0.988 | Destabilizing | 0.028 | N | 0.239 | neutral | N | 0.412653351 | None | None | N |
I/V | 0.0613 | likely_benign | 0.0649 | benign | -0.683 | Destabilizing | 0.001 | N | 0.169 | neutral | N | 0.388123052 | None | None | N |
I/W | 0.6478 | likely_pathogenic | 0.6488 | pathogenic | -0.899 | Destabilizing | 0.996 | D | 0.465 | neutral | None | None | None | None | N |
I/Y | 0.3939 | ambiguous | 0.4054 | ambiguous | -0.664 | Destabilizing | 0.953 | D | 0.332 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.