Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32063 | 96412;96413;96414 | chr2:178543957;178543956;178543955 | chr2:179408684;179408683;179408682 |
N2AB | 30422 | 91489;91490;91491 | chr2:178543957;178543956;178543955 | chr2:179408684;179408683;179408682 |
N2A | 29495 | 88708;88709;88710 | chr2:178543957;178543956;178543955 | chr2:179408684;179408683;179408682 |
N2B | 22998 | 69217;69218;69219 | chr2:178543957;178543956;178543955 | chr2:179408684;179408683;179408682 |
Novex-1 | 23123 | 69592;69593;69594 | chr2:178543957;178543956;178543955 | chr2:179408684;179408683;179408682 |
Novex-2 | 23190 | 69793;69794;69795 | chr2:178543957;178543956;178543955 | chr2:179408684;179408683;179408682 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.22 | D | 0.566 | 0.198 | 0.280181792013 | gnomAD-4.0.0 | 1.59141E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77269E-05 | None | 0 | 0 | 0 | 0 | 0 |
T/N | None | None | 0.001 | N | 0.31 | 0.149 | 0.148003135375 | gnomAD-4.0.0 | 1.36847E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79902E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.083 | likely_benign | 0.0829 | benign | -0.878 | Destabilizing | 0.22 | N | 0.566 | neutral | D | 0.527226863 | None | None | N |
T/C | 0.2771 | likely_benign | 0.2872 | benign | -0.389 | Destabilizing | 0.968 | D | 0.672 | neutral | None | None | None | None | N |
T/D | 0.3458 | ambiguous | 0.3499 | ambiguous | 0.358 | Stabilizing | 0.157 | N | 0.621 | neutral | None | None | None | None | N |
T/E | 0.3407 | ambiguous | 0.3368 | benign | 0.345 | Stabilizing | 0.396 | N | 0.625 | neutral | None | None | None | None | N |
T/F | 0.2697 | likely_benign | 0.2539 | benign | -1.058 | Destabilizing | 0.567 | D | 0.744 | deleterious | None | None | None | None | N |
T/G | 0.2361 | likely_benign | 0.2378 | benign | -1.106 | Destabilizing | 0.157 | N | 0.703 | prob.neutral | None | None | None | None | N |
T/H | 0.1956 | likely_benign | 0.2051 | benign | -1.314 | Destabilizing | 0.832 | D | 0.745 | deleterious | None | None | None | None | N |
T/I | 0.1515 | likely_benign | 0.1464 | benign | -0.368 | Destabilizing | 0.002 | N | 0.393 | neutral | N | 0.512990916 | None | None | N |
T/K | 0.2256 | likely_benign | 0.2222 | benign | -0.469 | Destabilizing | 0.396 | N | 0.636 | neutral | None | None | None | None | N |
T/L | 0.1224 | likely_benign | 0.1155 | benign | -0.368 | Destabilizing | 0.157 | N | 0.602 | neutral | None | None | None | None | N |
T/M | 0.1006 | likely_benign | 0.1012 | benign | -0.089 | Destabilizing | 0.832 | D | 0.658 | neutral | None | None | None | None | N |
T/N | 0.0764 | likely_benign | 0.0753 | benign | -0.334 | Destabilizing | 0.001 | N | 0.31 | neutral | N | 0.460772584 | None | None | N |
T/P | 0.3177 | likely_benign | 0.2858 | benign | -0.507 | Destabilizing | 0.667 | D | 0.673 | neutral | D | 0.530845958 | None | None | N |
T/Q | 0.2277 | likely_benign | 0.2359 | benign | -0.49 | Destabilizing | 0.567 | D | 0.667 | neutral | None | None | None | None | N |
T/R | 0.1912 | likely_benign | 0.1852 | benign | -0.27 | Destabilizing | 0.567 | D | 0.678 | prob.neutral | None | None | None | None | N |
T/S | 0.0885 | likely_benign | 0.0891 | benign | -0.706 | Destabilizing | 0.124 | N | 0.569 | neutral | N | 0.467853272 | None | None | N |
T/V | 0.1168 | likely_benign | 0.1169 | benign | -0.507 | Destabilizing | 0.157 | N | 0.562 | neutral | None | None | None | None | N |
T/W | 0.6669 | likely_pathogenic | 0.6531 | pathogenic | -0.955 | Destabilizing | 0.968 | D | 0.749 | deleterious | None | None | None | None | N |
T/Y | 0.253 | likely_benign | 0.2481 | benign | -0.725 | Destabilizing | 0.89 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.