Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32064 | 96415;96416;96417 | chr2:178543954;178543953;178543952 | chr2:179408681;179408680;179408679 |
N2AB | 30423 | 91492;91493;91494 | chr2:178543954;178543953;178543952 | chr2:179408681;179408680;179408679 |
N2A | 29496 | 88711;88712;88713 | chr2:178543954;178543953;178543952 | chr2:179408681;179408680;179408679 |
N2B | 22999 | 69220;69221;69222 | chr2:178543954;178543953;178543952 | chr2:179408681;179408680;179408679 |
Novex-1 | 23124 | 69595;69596;69597 | chr2:178543954;178543953;178543952 | chr2:179408681;179408680;179408679 |
Novex-2 | 23191 | 69796;69797;69798 | chr2:178543954;178543953;178543952 | chr2:179408681;179408680;179408679 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 1.0 | D | 0.648 | 0.365 | 0.500613528874 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2519 | likely_benign | 0.2046 | benign | -0.745 | Destabilizing | 0.999 | D | 0.461 | neutral | N | 0.499063778 | None | None | N |
T/C | 0.8318 | likely_pathogenic | 0.7893 | pathogenic | -0.299 | Destabilizing | 1.0 | D | 0.618 | neutral | None | None | None | None | N |
T/D | 0.7628 | likely_pathogenic | 0.6875 | pathogenic | 0.364 | Stabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
T/E | 0.7911 | likely_pathogenic | 0.7241 | pathogenic | 0.313 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
T/F | 0.8584 | likely_pathogenic | 0.7921 | pathogenic | -1.086 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
T/G | 0.4346 | ambiguous | 0.3822 | ambiguous | -0.922 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
T/H | 0.6902 | likely_pathogenic | 0.6162 | pathogenic | -1.226 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
T/I | 0.8162 | likely_pathogenic | 0.7504 | pathogenic | -0.383 | Destabilizing | 1.0 | D | 0.633 | neutral | N | 0.503787493 | None | None | N |
T/K | 0.6154 | likely_pathogenic | 0.5346 | ambiguous | -0.434 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
T/L | 0.4482 | ambiguous | 0.3534 | ambiguous | -0.383 | Destabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | N |
T/M | 0.3052 | likely_benign | 0.2487 | benign | -0.035 | Destabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | N |
T/N | 0.3453 | ambiguous | 0.2721 | benign | -0.21 | Destabilizing | 1.0 | D | 0.648 | neutral | D | 0.529691165 | None | None | N |
T/P | 0.6979 | likely_pathogenic | 0.6278 | pathogenic | -0.474 | Destabilizing | 1.0 | D | 0.625 | neutral | N | 0.502470819 | None | None | N |
T/Q | 0.6176 | likely_pathogenic | 0.5452 | ambiguous | -0.435 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
T/R | 0.5708 | likely_pathogenic | 0.4887 | ambiguous | -0.201 | Destabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | N |
T/S | 0.1948 | likely_benign | 0.1645 | benign | -0.539 | Destabilizing | 0.999 | D | 0.455 | neutral | N | 0.477531548 | None | None | N |
T/V | 0.5845 | likely_pathogenic | 0.51 | ambiguous | -0.474 | Destabilizing | 0.999 | D | 0.505 | neutral | None | None | None | None | N |
T/W | 0.9561 | likely_pathogenic | 0.9334 | pathogenic | -0.998 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
T/Y | 0.87 | likely_pathogenic | 0.8136 | pathogenic | -0.761 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.