Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32068 | 96427;96428;96429 | chr2:178543942;178543941;178543940 | chr2:179408669;179408668;179408667 |
N2AB | 30427 | 91504;91505;91506 | chr2:178543942;178543941;178543940 | chr2:179408669;179408668;179408667 |
N2A | 29500 | 88723;88724;88725 | chr2:178543942;178543941;178543940 | chr2:179408669;179408668;179408667 |
N2B | 23003 | 69232;69233;69234 | chr2:178543942;178543941;178543940 | chr2:179408669;179408668;179408667 |
Novex-1 | 23128 | 69607;69608;69609 | chr2:178543942;178543941;178543940 | chr2:179408669;179408668;179408667 |
Novex-2 | 23195 | 69808;69809;69810 | chr2:178543942;178543941;178543940 | chr2:179408669;179408668;179408667 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.012 | N | 0.515 | 0.068 | 0.107399877778 | gnomAD-4.0.0 | 3.18286E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86549E-05 | 0 |
S/L | None | None | 0.027 | N | 0.725 | 0.266 | 0.30212335484 | gnomAD-4.0.0 | 1.59141E-06 | None | None | None | None | N | None | 5.65867E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2073 | likely_benign | 0.1997 | benign | -0.894 | Destabilizing | 0.012 | N | 0.515 | neutral | N | 0.490513049 | None | None | N |
S/C | 0.1631 | likely_benign | 0.1793 | benign | -0.352 | Destabilizing | 0.824 | D | 0.73 | prob.delet. | None | None | None | None | N |
S/D | 0.9744 | likely_pathogenic | 0.9743 | pathogenic | -1.755 | Destabilizing | 0.149 | N | 0.701 | prob.neutral | None | None | None | None | N |
S/E | 0.9902 | likely_pathogenic | 0.99 | pathogenic | -1.442 | Destabilizing | 0.149 | N | 0.696 | prob.neutral | None | None | None | None | N |
S/F | 0.937 | likely_pathogenic | 0.9366 | pathogenic | -0.557 | Destabilizing | 0.555 | D | 0.79 | deleterious | None | None | None | None | N |
S/G | 0.3524 | ambiguous | 0.3406 | ambiguous | -1.344 | Destabilizing | 0.067 | N | 0.703 | prob.neutral | None | None | None | None | N |
S/H | 0.9271 | likely_pathogenic | 0.9346 | pathogenic | -1.434 | Destabilizing | 0.791 | D | 0.733 | prob.delet. | None | None | None | None | N |
S/I | 0.8061 | likely_pathogenic | 0.8102 | pathogenic | 0.315 | Stabilizing | 0.081 | N | 0.768 | deleterious | None | None | None | None | N |
S/K | 0.9969 | likely_pathogenic | 0.9971 | pathogenic | 0.376 | Stabilizing | 0.149 | N | 0.698 | prob.neutral | None | None | None | None | N |
S/L | 0.6 | likely_pathogenic | 0.6023 | pathogenic | 0.315 | Stabilizing | 0.027 | N | 0.725 | prob.delet. | N | 0.463174079 | None | None | N |
S/M | 0.6665 | likely_pathogenic | 0.6807 | pathogenic | -0.095 | Destabilizing | 0.555 | D | 0.737 | prob.delet. | None | None | None | None | N |
S/N | 0.7349 | likely_pathogenic | 0.7541 | pathogenic | -0.696 | Destabilizing | 0.149 | N | 0.669 | neutral | None | None | None | None | N |
S/P | 0.9818 | likely_pathogenic | 0.9766 | pathogenic | -0.058 | Destabilizing | 0.211 | N | 0.752 | deleterious | N | 0.467101326 | None | None | N |
S/Q | 0.9751 | likely_pathogenic | 0.976 | pathogenic | -0.174 | Destabilizing | 0.555 | D | 0.753 | deleterious | None | None | None | None | N |
S/R | 0.9939 | likely_pathogenic | 0.9943 | pathogenic | -0.39 | Destabilizing | 0.149 | N | 0.761 | deleterious | None | None | None | None | N |
S/T | 0.0864 | likely_benign | 0.1001 | benign | -0.236 | Destabilizing | None | N | 0.331 | neutral | N | 0.390658272 | None | None | N |
S/V | 0.6593 | likely_pathogenic | 0.6727 | pathogenic | -0.058 | Destabilizing | 0.035 | N | 0.724 | prob.delet. | None | None | None | None | N |
S/W | 0.969 | likely_pathogenic | 0.9695 | pathogenic | -0.933 | Destabilizing | 0.935 | D | 0.76 | deleterious | None | None | None | None | N |
S/Y | 0.9095 | likely_pathogenic | 0.9138 | pathogenic | -0.44 | Destabilizing | 0.555 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.