Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32074 | 96445;96446;96447 | chr2:178543924;178543923;178543922 | chr2:179408651;179408650;179408649 |
N2AB | 30433 | 91522;91523;91524 | chr2:178543924;178543923;178543922 | chr2:179408651;179408650;179408649 |
N2A | 29506 | 88741;88742;88743 | chr2:178543924;178543923;178543922 | chr2:179408651;179408650;179408649 |
N2B | 23009 | 69250;69251;69252 | chr2:178543924;178543923;178543922 | chr2:179408651;179408650;179408649 |
Novex-1 | 23134 | 69625;69626;69627 | chr2:178543924;178543923;178543922 | chr2:179408651;179408650;179408649 |
Novex-2 | 23201 | 69826;69827;69828 | chr2:178543924;178543923;178543922 | chr2:179408651;179408650;179408649 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.998 | N | 0.546 | 0.235 | 0.152612264143 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4019 | ambiguous | 0.3638 | ambiguous | 0.044 | Stabilizing | 0.998 | D | 0.588 | neutral | None | None | None | None | N |
K/C | 0.6637 | likely_pathogenic | 0.6457 | pathogenic | -0.096 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/D | 0.4497 | ambiguous | 0.4195 | ambiguous | 0.11 | Stabilizing | 0.998 | D | 0.575 | neutral | None | None | None | None | N |
K/E | 0.2353 | likely_benign | 0.2154 | benign | 0.093 | Stabilizing | 0.996 | D | 0.516 | neutral | N | 0.455400397 | None | None | N |
K/F | 0.8461 | likely_pathogenic | 0.8141 | pathogenic | -0.326 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
K/G | 0.4161 | ambiguous | 0.3807 | ambiguous | -0.113 | Destabilizing | 0.997 | D | 0.534 | neutral | None | None | None | None | N |
K/H | 0.2566 | likely_benign | 0.2548 | benign | -0.439 | Destabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | N |
K/I | 0.6166 | likely_pathogenic | 0.5627 | ambiguous | 0.366 | Stabilizing | 1.0 | D | 0.691 | prob.neutral | N | 0.473026355 | None | None | N |
K/L | 0.5537 | ambiguous | 0.4937 | ambiguous | 0.366 | Stabilizing | 1.0 | D | 0.549 | neutral | None | None | None | None | N |
K/M | 0.3398 | likely_benign | 0.3016 | benign | 0.327 | Stabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
K/N | 0.323 | likely_benign | 0.2955 | benign | 0.418 | Stabilizing | 0.884 | D | 0.343 | neutral | N | 0.379822416 | None | None | N |
K/P | 0.8836 | likely_pathogenic | 0.8613 | pathogenic | 0.285 | Stabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
K/Q | 0.1545 | likely_benign | 0.1476 | benign | 0.178 | Stabilizing | 0.999 | D | 0.649 | neutral | N | 0.477989255 | None | None | N |
K/R | 0.0852 | likely_benign | 0.0853 | benign | 0.176 | Stabilizing | 0.998 | D | 0.546 | neutral | N | 0.456632548 | None | None | N |
K/S | 0.3909 | ambiguous | 0.3594 | ambiguous | -0.076 | Destabilizing | 0.997 | D | 0.537 | neutral | None | None | None | None | N |
K/T | 0.2226 | likely_benign | 0.2015 | benign | 0.041 | Stabilizing | 0.999 | D | 0.593 | neutral | N | 0.505637217 | None | None | N |
K/V | 0.5189 | ambiguous | 0.4647 | ambiguous | 0.285 | Stabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
K/W | 0.8088 | likely_pathogenic | 0.7879 | pathogenic | -0.341 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
K/Y | 0.6379 | likely_pathogenic | 0.6074 | pathogenic | 0.044 | Stabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.