Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32078 | 96457;96458;96459 | chr2:178543912;178543911;178543910 | chr2:179408639;179408638;179408637 |
N2AB | 30437 | 91534;91535;91536 | chr2:178543912;178543911;178543910 | chr2:179408639;179408638;179408637 |
N2A | 29510 | 88753;88754;88755 | chr2:178543912;178543911;178543910 | chr2:179408639;179408638;179408637 |
N2B | 23013 | 69262;69263;69264 | chr2:178543912;178543911;178543910 | chr2:179408639;179408638;179408637 |
Novex-1 | 23138 | 69637;69638;69639 | chr2:178543912;178543911;178543910 | chr2:179408639;179408638;179408637 |
Novex-2 | 23205 | 69838;69839;69840 | chr2:178543912;178543911;178543910 | chr2:179408639;179408638;179408637 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1157695554 | 0.491 | 1.0 | N | 0.683 | 0.577 | 0.462287137294 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
Y/C | rs1157695554 | 0.491 | 1.0 | N | 0.683 | 0.577 | 0.462287137294 | gnomAD-4.0.0 | 1.59147E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.773E-04 | None | 0 | 0 | 0 | 0 | 0 |
Y/S | rs1157695554 | -0.149 | 1.0 | N | 0.663 | 0.505 | 0.520535218364 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.5574 | ambiguous | 0.5633 | ambiguous | -0.501 | Destabilizing | 1.0 | D | 0.594 | neutral | None | None | None | None | I |
Y/C | 0.2365 | likely_benign | 0.2355 | benign | 0.207 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.473845595 | None | None | I |
Y/D | 0.2694 | likely_benign | 0.2604 | benign | 0.871 | Stabilizing | 1.0 | D | 0.69 | prob.neutral | N | 0.407201019 | None | None | I |
Y/E | 0.6207 | likely_pathogenic | 0.6149 | pathogenic | 0.847 | Stabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | I |
Y/F | 0.1291 | likely_benign | 0.1306 | benign | -0.288 | Destabilizing | 0.999 | D | 0.549 | neutral | N | 0.435217126 | None | None | I |
Y/G | 0.4764 | ambiguous | 0.4728 | ambiguous | -0.676 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | I |
Y/H | 0.196 | likely_benign | 0.1938 | benign | 0.249 | Stabilizing | 1.0 | D | 0.672 | neutral | N | 0.456957835 | None | None | I |
Y/I | 0.6584 | likely_pathogenic | 0.665 | pathogenic | -0.072 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
Y/K | 0.6072 | likely_pathogenic | 0.6008 | pathogenic | 0.288 | Stabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | I |
Y/L | 0.5537 | ambiguous | 0.5599 | ambiguous | -0.072 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | I |
Y/M | 0.6332 | likely_pathogenic | 0.6425 | pathogenic | 0.005 | Stabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | I |
Y/N | 0.1187 | likely_benign | 0.1177 | benign | 0.098 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | N | 0.415975218 | None | None | I |
Y/P | 0.953 | likely_pathogenic | 0.9447 | pathogenic | -0.196 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
Y/Q | 0.5 | ambiguous | 0.5049 | ambiguous | 0.156 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
Y/R | 0.4249 | ambiguous | 0.4299 | ambiguous | 0.478 | Stabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | I |
Y/S | 0.2425 | likely_benign | 0.2437 | benign | -0.28 | Destabilizing | 1.0 | D | 0.663 | neutral | N | 0.415337712 | None | None | I |
Y/T | 0.4473 | ambiguous | 0.4605 | ambiguous | -0.212 | Destabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | I |
Y/V | 0.5406 | ambiguous | 0.5515 | ambiguous | -0.196 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
Y/W | 0.4779 | ambiguous | 0.4615 | ambiguous | -0.484 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.