Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32097 | 96514;96515;96516 | chr2:178543855;178543854;178543853 | chr2:179408582;179408581;179408580 |
N2AB | 30456 | 91591;91592;91593 | chr2:178543855;178543854;178543853 | chr2:179408582;179408581;179408580 |
N2A | 29529 | 88810;88811;88812 | chr2:178543855;178543854;178543853 | chr2:179408582;179408581;179408580 |
N2B | 23032 | 69319;69320;69321 | chr2:178543855;178543854;178543853 | chr2:179408582;179408581;179408580 |
Novex-1 | 23157 | 69694;69695;69696 | chr2:178543855;178543854;178543853 | chr2:179408582;179408581;179408580 |
Novex-2 | 23224 | 69895;69896;69897 | chr2:178543855;178543854;178543853 | chr2:179408582;179408581;179408580 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1559126683 | None | 0.884 | N | 0.385 | 0.37 | 0.474643619859 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0887 | likely_benign | 0.0876 | benign | -0.434 | Destabilizing | 0.998 | D | 0.511 | neutral | N | 0.50435279 | None | None | N |
T/C | 0.4483 | ambiguous | 0.4783 | ambiguous | -0.29 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
T/D | 0.5766 | likely_pathogenic | 0.552 | ambiguous | 0.236 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
T/E | 0.5131 | ambiguous | 0.4894 | ambiguous | 0.173 | Stabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
T/F | 0.2639 | likely_benign | 0.2783 | benign | -0.843 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
T/G | 0.2928 | likely_benign | 0.2912 | benign | -0.591 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
T/H | 0.303 | likely_benign | 0.3199 | benign | -0.883 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
T/I | 0.2174 | likely_benign | 0.2124 | benign | -0.137 | Destabilizing | 0.884 | D | 0.385 | neutral | N | 0.495393702 | None | None | N |
T/K | 0.4179 | ambiguous | 0.3804 | ambiguous | -0.399 | Destabilizing | 1.0 | D | 0.769 | deleterious | N | 0.490096875 | None | None | N |
T/L | 0.1456 | likely_benign | 0.1435 | benign | -0.137 | Destabilizing | 0.994 | D | 0.575 | neutral | None | None | None | None | N |
T/M | 0.0975 | likely_benign | 0.0965 | benign | 0.043 | Stabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
T/N | 0.1597 | likely_benign | 0.1595 | benign | -0.2 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
T/P | 0.3011 | likely_benign | 0.2657 | benign | -0.206 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.506269481 | None | None | N |
T/Q | 0.3093 | likely_benign | 0.3078 | benign | -0.415 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
T/R | 0.3449 | ambiguous | 0.31 | benign | -0.142 | Destabilizing | 1.0 | D | 0.789 | deleterious | N | 0.495278343 | None | None | N |
T/S | 0.1077 | likely_benign | 0.1102 | benign | -0.446 | Destabilizing | 0.999 | D | 0.486 | neutral | N | 0.481147857 | None | None | N |
T/V | 0.1349 | likely_benign | 0.1404 | benign | -0.206 | Destabilizing | 0.985 | D | 0.512 | neutral | None | None | None | None | N |
T/W | 0.6387 | likely_pathogenic | 0.6425 | pathogenic | -0.825 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
T/Y | 0.3122 | likely_benign | 0.3268 | benign | -0.551 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.