Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32127 | 96604;96605;96606 | chr2:178543594;178543593;178543592 | chr2:179408321;179408320;179408319 |
N2AB | 30486 | 91681;91682;91683 | chr2:178543594;178543593;178543592 | chr2:179408321;179408320;179408319 |
N2A | 29559 | 88900;88901;88902 | chr2:178543594;178543593;178543592 | chr2:179408321;179408320;179408319 |
N2B | 23062 | 69409;69410;69411 | chr2:178543594;178543593;178543592 | chr2:179408321;179408320;179408319 |
Novex-1 | 23187 | 69784;69785;69786 | chr2:178543594;178543593;178543592 | chr2:179408321;179408320;179408319 |
Novex-2 | 23254 | 69985;69986;69987 | chr2:178543594;178543593;178543592 | chr2:179408321;179408320;179408319 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.896 | N | 0.637 | 0.362 | 0.305086939656 | gnomAD-4.0.0 | 2.7501E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69889E-06 | 0 | 1.6581E-05 |
E/Q | None | None | 0.946 | N | 0.585 | 0.187 | 0.242244723065 | gnomAD-4.0.0 | 1.60953E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86E-06 | 0 | 0 |
E/V | None | None | 0.984 | N | 0.703 | 0.453 | 0.470484629704 | gnomAD-4.0.0 | 6.87524E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99628E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1744 | likely_benign | 0.1604 | benign | -0.864 | Destabilizing | 0.896 | D | 0.637 | neutral | N | 0.458838639 | None | None | N |
E/C | 0.8018 | likely_pathogenic | 0.7949 | pathogenic | -0.447 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
E/D | 0.0664 | likely_benign | 0.0654 | benign | -0.975 | Destabilizing | 0.004 | N | 0.172 | neutral | N | 0.424301991 | None | None | N |
E/F | 0.8441 | likely_pathogenic | 0.8246 | pathogenic | -0.46 | Destabilizing | 0.996 | D | 0.767 | deleterious | None | None | None | None | N |
E/G | 0.1618 | likely_benign | 0.1369 | benign | -1.186 | Destabilizing | 0.896 | D | 0.643 | neutral | N | 0.482696934 | None | None | N |
E/H | 0.5404 | ambiguous | 0.4951 | ambiguous | -0.654 | Destabilizing | 0.996 | D | 0.623 | neutral | None | None | None | None | N |
E/I | 0.5208 | ambiguous | 0.4903 | ambiguous | None | Stabilizing | 0.988 | D | 0.77 | deleterious | None | None | None | None | N |
E/K | 0.3022 | likely_benign | 0.2502 | benign | -0.559 | Destabilizing | 0.896 | D | 0.573 | neutral | N | 0.441578243 | None | None | N |
E/L | 0.5082 | ambiguous | 0.4825 | ambiguous | None | Stabilizing | 0.988 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/M | 0.5343 | ambiguous | 0.5102 | ambiguous | 0.376 | Stabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
E/N | 0.1676 | likely_benign | 0.1534 | benign | -0.937 | Destabilizing | 0.851 | D | 0.581 | neutral | None | None | None | None | N |
E/P | 0.616 | likely_pathogenic | 0.5996 | pathogenic | -0.267 | Destabilizing | 0.988 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/Q | 0.1866 | likely_benign | 0.1687 | benign | -0.848 | Destabilizing | 0.946 | D | 0.585 | neutral | N | 0.463359025 | None | None | N |
E/R | 0.4524 | ambiguous | 0.3877 | ambiguous | -0.273 | Destabilizing | 0.988 | D | 0.625 | neutral | None | None | None | None | N |
E/S | 0.1845 | likely_benign | 0.1655 | benign | -1.214 | Destabilizing | 0.919 | D | 0.565 | neutral | None | None | None | None | N |
E/T | 0.2521 | likely_benign | 0.2367 | benign | -0.957 | Destabilizing | 0.919 | D | 0.678 | prob.neutral | None | None | None | None | N |
E/V | 0.3111 | likely_benign | 0.2897 | benign | -0.267 | Destabilizing | 0.984 | D | 0.703 | prob.neutral | N | 0.495183442 | None | None | N |
E/W | 0.9268 | likely_pathogenic | 0.9132 | pathogenic | -0.231 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
E/Y | 0.6946 | likely_pathogenic | 0.6516 | pathogenic | -0.224 | Destabilizing | 0.996 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.